Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000157g0034 ATGGCAAAAGGCAAGTTTGAACGTACCAAGCCTCACGTGAACGTGGGCACGATTGGTCACGTTGACCATGGCAAGACCACGCTGACGGCTGCTATCGCAACCGTGCTGGCCTCGAAGTTTGGCGGCGAAGCCAAGGCCTACGACCAGATCGACGCGGCTCCCGAAGAAAAGGCCCGCGGCATCACGATCAACACCGCTCACGTGGAATACGAGACGGCCAACCGCCACTACGCGCACGTTGACTGCCCCGGCCACGCTGACTATGTGAAGAACATGATCACCGGCGCCGCTCAGATGGACGGCGCGATCCTGGTGTGCTCGGCCGCTGACGGCCCGATGCCCCAGACCCGCGAGCACATCCTGCTGGCGCGTCAGGTGGGCGTGAAGTACATCATCGTGTTCCTGAACAAGTGCGACATGGTGGACGACGCCGAGCTGCTGGAGCTGGTGGAAATGGAAGTCCGCGAGCTGCTGAGCAAGTACGACTTCCCGGGCGACGACACTCCGATCATCAAGGGTTCGGCCAAGCTGGCGCTGGAAGGCGACAAGGGCGACCTGGGCGAGCAGGCCATCATGCGCCTGGCCGATGCACTGGACAGCTACATCCCCACGCCTGAGCGCGCTGTGGACGGCGCTTTCCTGCTGCCGGTGGAAGACGTGTTCTCGATCTCCGGCCGTGGCACCGTGGTGACCGGTCGTGTTGAGCGCGGCATCATCAAGGTCGGCGAGGAAATCGAAATCGTCGGTATCCGTGATCTGCAAAAGACCACCGTCACCGGCGTGGAAATGTTCCGCAAGCTGCTGGACCAAGGTCAGGCTGGCGACAACGTCGGTATCCTGCTGCGCGGCACCAAGCGTGAAGACGTCGAGCGCGGCCAAGTGCTGGCCAAGCCCGGCTCGATCAAGCCGCACACCCACTTCACTGCTGAGATCTACGTTCTGAGCAAGGAAGAAGGCGGCCGTCACACCCCGTTCTTCAACAACTACCGTCCCCAGTTCTACTTCCGCACGACGGACGTGACCGGTGCCGTGGAGCTGCCGAAGGACAAGGAAATGGTCATGCCTGGCGACAACGTCAGCATCACCGTGAAGCTGATCGCTCCGATCGCCATGGAAGAAGGTCTGCGTTTCGCTATCCGTGAAGGCGGTCGTACCGTCGGCTCGGGTGTCGTGGCGACGATCATCGAAAGTGAGTTCAATGTCCAATCCTCAAGTCGAAACAGTGACGACCGGCGCCGACAAGGCCAAGCTGGCGGGCGCTGTCGTCCTGCTCGTGGCCGCGCTGGTTGCGTTTTATGCGCTGGGCAAGCAGGGTCCTTGGGTGCAGTGGGGCGCACTGATCGTGCTGCTGGCCGCCGCCGCGGGTGCCTTCCTGACCTCCGAGTCCGGTCGCTCCCTGATCGCCTACGGCCAGGACTCCGTCAAGGAAGTCCGCAAGGTGGTCTGGCCGACGGGCAAGGAAGCCCGTCAGATGACCCTTTACGTCTTTGCGTTCGTCGTGGTGATGGCGCTCTTCCTGTGGCTCACGGACAAGACGCTGGAATGGGTGCTGTACGACCTGATCCTGGGCTGGAAACGCTGAGCGAAGAGATAGGACCGAGATGA 1605 0.6199 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLASKFGGEAKAYDQIDAAPEEKARGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLARQVGVKYIIVFLNKCDMVDDAELLELVEMEVRELLSKYDFPGDDTPIIKGSAKLALEGDKGDLGEQAIMRLADALDSYIPTPERAVDGAFLLPVEDVFSISGRGTVVTGRVERGIIKVGEEIEIVGIRDLQKTTVTGVEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVLAKPGSIKPHTHFTAEIYVLSKEEGGRHTPFFNNYRPQFYFRTTDVTGAVELPKDKEMVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGSGVVATIIESEFNVQSSSRNSDDRRRQGQAGGRCRPARGRAGCVLCAGQAGSLGAVGRTDRAAGRRRGCLPDLRVRSLPDRLRPGLRQGSPQGGLADGQGSPSDDPLRLCVRRGDGALPVAHGQDAGMGAVRPDPGLETLSEEIGPR 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000157g0034 534 Pfam Elongation factor Tu domain 2 227 295 IPR004161 GO:0005525
Bisa1000157g0034 534 Pfam Elongation factor Tu C-terminal domain 300 394 IPR004160 -
Bisa1000157g0034 534 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 221 IPR027417 -
Bisa1000157g0034 534 SUPERFAMILY Translation proteins 207 303 IPR009000 -
Bisa1000157g0034 534 CDD EF_Tu 11 205 IPR041709 -
Bisa1000157g0034 534 NCBIfam elongation factor Tu 1 396 IPR004541 GO:0003746|GO:0005525|GO:0006414
Bisa1000157g0034 534 FunFam Elongation factor Tu 208 336 - -
Bisa1000157g0034 534 CDD EFTU_III 302 391 - -
Bisa1000157g0034 534 Gene3D - 1 205 IPR027417 -
Bisa1000157g0034 534 NCBIfam small GTP-binding protein domain 13 149 IPR005225 GO:0005525
Bisa1000157g0034 534 MobiDBLite consensus disorder prediction 401 423 - -
Bisa1000157g0034 534 Pfam Elongation factor Tu GTP binding domain 10 203 IPR000795 GO:0003924|GO:0005525
Bisa1000157g0034 534 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 IPR031157 -
Bisa1000157g0034 534 Gene3D Translation factors 340 395 - -
Bisa1000157g0034 534 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 10 206 IPR000795 GO:0003924|GO:0005525
Bisa1000157g0034 534 Hamap Elongation factor Tu [tuf]. 1 396 IPR004541 GO:0003746|GO:0005525|GO:0006414
Bisa1000157g0034 534 PRINTS GTP-binding elongation factor signature 14 27 IPR000795 GO:0003924|GO:0005525
Bisa1000157g0034 534 PRINTS GTP-binding elongation factor signature 131 140 IPR000795 GO:0003924|GO:0005525
Bisa1000157g0034 534 PRINTS GTP-binding elongation factor signature 94 105 IPR000795 GO:0003924|GO:0005525
Bisa1000157g0034 534 PRINTS GTP-binding elongation factor signature 58 66 IPR000795 GO:0003924|GO:0005525
Bisa1000157g0034 534 PRINTS GTP-binding elongation factor signature 78 88 IPR000795 GO:0003924|GO:0005525
Bisa1000157g0034 534 PANTHER ELONGATION FACTOR TU-RELATED 6 397 - -
Bisa1000157g0034 534 MobiDBLite consensus disorder prediction 467 534 - -
Bisa1000157g0034 534 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 304 403 IPR009001 -
Bisa1000157g0034 534 CDD EFTU_II 213 299 IPR033720 -
Bisa1000157g0034 534 FunFam Elongation factor Tu 1 205 - -
Bisa1000157g0034 534 Gene3D Translation factors 208 336 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa1000157g0034 1 394 Eukaryotic Initiation Factors Gene Family AT5G60390 30.248 2.23e-43 158