Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000157g0019 ATGGAAGTGCCGCGCATCACCAAGATCACGCTGAACATGGGCGTGAGCGAGGCTGTTGCCGACAAGAAGGTCATGGACCACGCCGTGGGCGACCTGACCAAGATCGCCGGCCAGAAGCCCGTGGTCACCAAGTCGAAGAAGGCCATCGCCGGCTTCAAGATCCGTGACGGCGTGCCCATCGGTTGCATGGTCACCCTGCGCGGTGCACAGATGTACGAATTCCTGGACCGTTTCGTGACCGTGGCCCTGCCGCGCGTGCGTGACTTCCGTGGTATCTCCGGTCGCTCGTTCGATGGACGTGGCAACTACAACATCGGCGTCAAAGAACAGATCATCTTCCCCGAAATCGAATACGACAAGGTGGATGCTCTGCGTGGTCTGAACATCAGCATCACGACGACCGCCAAGACGGACGACGAAGCCAAGGCTCTGCTGGCTGCCAAGAAGTCGGATGAAGAGCGCTACCTCGCACGCCTGGAGCTGCAGAAGCTGCCTCGCAACGCCAACCCCACCCGCCAGCGCAACCGCTGCGAACTGACCGGTCGCCCCCGTGGCACCTTCCGCAAGTTCGGCCTGGCACGTAACAAGATTCGTGAGCTGGCCTTCAAGGGCGACATCCCCGGTGTCGTCAAGGCCAGCTGGTAA 645 0.6124 MEVPRITKITLNMGVSEAVADKKVMDHAVGDLTKIAGQKPVVTKSKKAIAGFKIRDGVPIGCMVTLRGAQMYEFLDRFVTVALPRVRDFRGISGRSFDGRGNYNIGVKEQIIFPEIEYDKVDALRGLNISITTTAKTDDEAKALLAAKKSDEERYLARLELQKLPRNANPTRQRNRCELTGRPRGTFRKFGLARNKIRELAFKGDIPGVVKASW 214
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000157g0019 214 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 1 146 IPR002132 GO:0003735|GO:0005840|GO:0006412
Bisa1000157g0019 214 Pfam Ribosomal protein S14p/S29e 161 213 IPR001209 GO:0003735|GO:0005840|GO:0006412
Bisa1000157g0019 214 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 149 214 - -
Bisa1000157g0019 214 ProSitePatterns Ribosomal protein L5 signature. 32 48 IPR020929 GO:0003735|GO:0005840|GO:0006412
Bisa1000157g0019 214 Gene3D - 1 145 IPR022803 -
Bisa1000157g0019 214 SUPERFAMILY RL5-like 1 147 IPR022803 -
Bisa1000157g0019 214 Pfam ribosomal L5P family C-terminus 59 147 IPR031309 -
Bisa1000157g0019 214 FunFam 50S ribosomal protein L5 1 150 - -
Bisa1000157g0019 214 Pfam Ribosomal protein L5 1 55 IPR031310 -
Bisa1000157g0019 214 Gene3D 30s Ribosomal Protein S14; Chain N 146 214 IPR043140 -
Bisa1000157g0019 214 Hamap 50S ribosomal protein L5 [rplE]. 1 154 IPR020930 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa1000157g0019 5 132 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 26.562 7.35e-09 51.6