Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa1000157g0018 | ATGAGTGATCCTATCGCCGATATGCTGACCCGCATTCGCAACGCCCAAAGCGTTGAGAAGGCCAGCGTCGTGATGCCTTCCTCCAAGCTGAAGGTCGCGATCGCCAAGGTCCTGAAGGATGAAGGCTATATCGACGATTTCGCGGTGCGTGGCGATGCCGCCCGCCCCGAGCTCGAAATTGCGCTGAAGTACTACGCCGGTCGCCCGGTGATCGAGCGCATCGAGCGCGTGAGCCGTCCTGGCCTGCGCATCTACAAGGGCCGCCACGACATTCCTCAGGTCATGAACGGCCTGGGTGTGGCGATTGTCACGACGCCCAAGGGCGTGATGACTGACCGCAAGGCACGTCAAGCCGGTGTCGGCGGCGAAGTGCTTTGCTACGTCGCCTAA | 390 | 0.6154 | MSDPIADMLTRIRNAQSVEKASVVMPSSKLKVAIAKVLKDEGYIDDFAVRGDAARPELEIALKYYAGRPVIERIERVSRPGLRIYKGRHDIPQVMNGLGVAIVTTPKGVMTDRKARQAGVGGEVLCYVA | 129 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa1000157g0018 | 129 | FunFam | 30S ribosomal protein S8 | 72 | 129 | - | - | |
| Bisa1000157g0018 | 129 | Pfam | Ribosomal protein S8 | 3 | 128 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 | |
| Bisa1000157g0018 | 129 | FunFam | 30S ribosomal protein S8 | 1 | 71 | - | - | |
| Bisa1000157g0018 | 129 | Gene3D | - | 1 | 71 | - | - | |
| Bisa1000157g0018 | 129 | SUPERFAMILY | Ribosomal protein S8 | 1 | 128 | IPR035987 | GO:0003735|GO:0005840|GO:0006412 | |
| Bisa1000157g0018 | 129 | Gene3D | - | 72 | 129 | - | - | |
| Bisa1000157g0018 | 129 | PANTHER | 40S RIBOSOMAL PROTEIN S15A | 3 | 128 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 | |
| Bisa1000157g0018 | 129 | Hamap | 30S ribosomal protein S8 [rpsH]. | 1 | 129 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 | |
| Bisa1000157g0018 | 129 | ProSitePatterns | Ribosomal protein S8 signature. | 99 | 116 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa1000157g0018 | 5 | 128 | Cytoplasmic Ribosomal Protein Gene Family | AT2G39590 | 26.471 | 3.81e-06 | 41.6 |