Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000157g0004 ATGGAGATTGCCCGCGCCTTGTGCAGCGACCCCACGCTGCTGCTGCTCGACGAGCCGGCGGCCGGCCTGCGGCTCAAGGAAAAGCAGGCCCTGGCCGAGGTGCTGCGCCAGCTGCGGCAGGAAGGCCTGAGCATCCTGCTGGTGGAGCACGACATGGATTTCGTGATGGGTCTCACCGACCGCATCGTGGTGATGGAATTCGGCACTCGTCTGATGGAGGGCACCCCGCAGGAGGTGCAGGACAGCCCCGCGGGTCTGAGTGCCGCTTACGGCCGGGCCGAAGTGCTGACCGGCCTGAACCTGCGCCTGCGGCAGGGTGAGGTGGTGACGGTGATCGGCCCCAACGGTGCGGGCAAGAGCACCACGCTCAATGCGCTGATGGGCGTGCTGCCGTCGCGCGGGCGCATTGCCTTCCAGGGCGAGGACCTGCAGGGCCTGGACCTGGAACAGCGGGTGATGAAGGGACTGGCGCTGGTGCCGGAAAAGCGTGAACTCTTCACCACGATGACGGTGGAGGACAACCTGGTGCTCGGCGGCTTTCGGCCGATGCGGCTGGGCCAGCGGGACTGGCGCGAGCAGATCGACACGGTCTATGGCCTGTTCCCGCGGCTGCAGGAGCGCCGGCAACAACTGGCGGGCACCCTGTCCGGCGGAGAGCGGCAGATGCTGGCGGTCGGCCGCGCGCTGATGGGCCGGCCGTCGGTGCTGATGCTGGATGAGCCGAGCCTGGGCCTGGCGCCGCTGATCGTGAAGGACATCTTCCGCATCGTCGCGCGCCTGCGGGACACCGGCGTCTCGATCCTGCTGGTCGAGCAGAACGCGCGCGCGGCGCTGGAGGTGGCCGACTACGCGTATGTGCTGGAAACCGGCGAGATCGCGCTGGAAGGTCCGGCGGCTGACCTCGCCAGGGATGCACGGGTGGTGGAGACCTATCTGGGCAGCAGCAGGCGAGGCGGCGCCGACATCGCCAACGTATCTGCCGCCAACGCATCTGCCGCTGACGTGGCTGTCGCTGTTCCCCCCATCAACGCGGGGGATGCGACCTAG 1047 0.6858 MEIARALCSDPTLLLLDEPAAGLRLKEKQALAEVLRQLRQEGLSILLVEHDMDFVMGLTDRIVVMEFGTRLMEGTPQEVQDSPAGLSAAYGRAEVLTGLNLRLRQGEVVTVIGPNGAGKSTTLNALMGVLPSRGRIAFQGEDLQGLDLEQRVMKGLALVPEKRELFTTMTVEDNLVLGGFRPMRLGQRDWREQIDTVYGLFPRLQERRQQLAGTLSGGERQMLAVGRALMGRPSVLMLDEPSLGLAPLIVKDIFRIVARLRDTGVSILLVEQNARAALEVADYAYVLETGEIALEGPAADLARDARVVETYLGSSRRGGADIANVSAANASAADVAVAVPPINAGDAT 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000157g0004 348 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 79 314 IPR003439 GO:0005524
Bisa1000157g0004 348 Pfam ABC transporter 97 242 IPR003439 GO:0005524
Bisa1000157g0004 348 ProSitePatterns ABC transporters family signature. 215 229 IPR017871 GO:0005524|GO:0016887
Bisa1000157g0004 348 PANTHER HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT ATP-BINDING PROTEIN LIVF 2 82 - -
Bisa1000157g0004 348 CDD ABC_TM1139_LivF_branched 85 304 - -
Bisa1000157g0004 348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 84 IPR027417 -
Bisa1000157g0004 348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 313 IPR027417 -
Bisa1000157g0004 348 SMART AAA_5 105 291 IPR003593 GO:0016887
Bisa1000157g0004 348 Gene3D - 87 315 IPR027417 -
Bisa1000157g0004 348 Gene3D - 1 86 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa1000157g0004 94 245 Calmodulin-binding Proteins AT2G36910 28.025 5.24e-13 68.6