Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000098g0015 ATGCGCCTGCTGATCGTCGAGGACGATCCCGTCATCGCCGATCAGATCGCCCGCAGCCTGCACGCCGTGGGGCATCAGCTGCGCGTGGCGGCGACGGGGGCGGCGGCGCTGCTGGCGTTGCGGCAGGACGATTGCGACGCGATCGTGCTCGACCGGATGCTGCCCGATCTCAACGGCTTGTCGGTGATCGACCAGATCCGCCGTGACGGCCTGTCCACGCCGATCCTGATGCTGAGCGCGCTGGGATCGGTGAAGGACCGGATCGAGGGGCTGGCGAGCGGCGCGGACGATTATCTCGCCAAGCCGTTCGACATGGACGAACTCGCCGCACGCATTGCGGCGATCGCGCGGCGCGGCACCCCGGCGGGTGACAGCGCGCGGTTGGAGGTTGGGCGGCTGCGGCTCGATCCCAGCGGCCATCAGGCCTGCGGGGTGCGGGCTACATCCTGCGGTCCGAACGATGCGCCTGATCATGCGGCTCGCCGGTTGGGGAGGGCGGGGGCGTCCGCATGGCCTGGGGCGGCTGCCGATCCAGGTCGGGTTGACCTTTACCGTGATGATGGCGCTGGTCGGGGTGATCGGGTTCAGCGTCGCCGATGCGTGGATCGCGCGCCGGTCGGATCGCCGGGCGGCTCGACATCGCGCCGCCGCGGCTCGGCTATTCCAACGTCCACTTCCATGCGGGTGGGCGCGGCACGCAAAAGGGGCGCGCGCTGGCGACACGGCTACCGAGCGGCAGCCTGCTCGTCATCGTCCAGCATAGCCGAGGCGGGGGAATCGCTGCACGAACTCCTGCCCTGGGTCGTCGTCGCGCTGTCCCTGGCCGCCGCAGTGACCGGCGTCGCAGTGACGTTGGTGTTCGCGCGGCTGATCGCGGTGCGCCTCGCCGCGACGCAGGAGACGGCAGACGCGATCGCGGGCGGCGACCTCAGCCGACGCGTGCCGACGCAGGGGCTGGACGGCGTGTTCGCGGGGCAGGCCGACAGCCTCAATCGCATGCTCGACCGGATGGACGATCTGGTCCGCAGCCAGCGGTTGTTTCGCGAGCAACCTGGCGCACGATCTGCGTACGCCGCTCACCCGGCTGCGCGGCATCCTGCGCAACGGCGCGGAGGATCCCGCCGTGCTGGAGCGGGCAGAGCGCGAATGCGCGGCGATCATCCGCATCTTCGACGCGCTGCTCCGGCTGGCGGAGATCGAGGGTGGGCGGCATCCGGCGGCGCTTGCCCCGCTCGATCTGCGTGCGTTGATCGAGGATGTCGCCGAGACGATGGAGCCGGTGCTGGCCGACCACGATGGCACGCTGACGCTGGAGTTGGGGCCGTGGCCGATGGTGGCGGGGACGCCGATCTGCTGGGGCAGATGCTGGTCAATGTGCTCGACAATGTCGTGACGCACACGCCGCGCGGCACCCACGCGCGCCTGTCGCTGGCGTCGGAGAGCGGCTTTGCGCGCATCACGGTGGCGGACGATGGCCGGGGCTGGCCGAGGCCGACCGCGCGCGCGTGGTGCAGGCGTTCGAGCGCGCCGCCCAGGCGGAAACGCGCGGCAGCGGGCTGGGGCTGGCGATCGTCCAGGCGATCGTCCGCTTCCACGGCGGCACGCTGCGGCTGGACGATGCCCGGCCGGGTCTCGCCGTCCGGATCGCGCTGCCGCTTATGCCGCCTGACGCTTGCGCCGGTTCCGCCGCCGGTTGAGCCACATCGTCAGATACATCCAGAATCCGGAGCCCGCGAAGAACAGCAGCGCGCCGCCGCCGCCGATGTTGAGCGCGATGCCCACTGGGCCCAGCGTCTCGCCCGAATGGATATGCTTGAACCAGCGGTTCCAGCTCTTCATCGGGCTTGGCGCCGCCGACGCCTCGGCGGATGCCGTCCTGGCCGGCGCGTGATCGAGCAGATCGGTCGCCTGCGTCGCCAGACCGGTCGCGGCGAGCAGCAGTAG 1944 0.7109 MRLLIVEDDPVIADQIARSLHAVGHQLRVAATGAAALLALRQDDCDAIVLDRMLPDLNGLSVIDQIRRDGLSTPILMLSALGSVKDRIEGLASGADDYLAKPFDMDELAARIAAIARRGTPAGDSARLEVGRLRLDPSGHQACGVRATSCGPNDAPDHAARRLGRAGASAWPGAAADPGRVDLYRDDGAGRGDRVQRRRCVDRAPVGSPGGSTSRRRGSAIPTSTSMRVGAARKRGARWRHGYRAAACSSSSSIAEAGESLHELLPWVVVALSLAAAVTGVAVTLVFARLIAVRLAATQETADAIAGGDLSRRVPTQGLDGVFAGQADSLNRMLDRMDDLVRSQRLFREQPGARSAYAAHPAARHPAQRRGGSRRAGAGRARMRGDHPHLRRAAPAGGDRGWAASGGACPARSACVDRGCRRDDGAGAGRPRWHADAGVGAVADGGGDADLLGQMLVNVLDNVVTHTPRGTHARLSLASESGFARITVADDGRGWPRPTARAWCRRSSAPPRRKRAAAGWGWRSSRRSSASTAARCGWTMPGRVSPSGSRCRLCRLTLAPVPPPVEPHRQIHPESGAREEQQRAAAADVERDAHWAQRLARMDMLEPAVPALHRAWRRRRLGGCRPGRRVIEQIGRLRRQTGRGEQQ 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000098g0015 647 Gene3D - 250 345 - -
Bisa1000098g0015 647 ProSiteProfiles HAMP domain profile. 289 342 IPR003660 GO:0007165|GO:0016020
Bisa1000098g0015 647 MobiDBLite consensus disorder prediction 351 402 - -
Bisa1000098g0015 647 CDD HAMP 299 336 - -
Bisa1000098g0015 647 MobiDBLite consensus disorder prediction 564 585 - -
Bisa1000098g0015 647 MobiDBLite consensus disorder prediction 146 231 - -
Bisa1000098g0015 647 MobiDBLite consensus disorder prediction 571 585 - -
Bisa1000098g0015 647 ProSiteProfiles Response regulatory domain profile. 2 116 IPR001789 GO:0000160
Bisa1000098g0015 647 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 447 527 IPR036890 -
Bisa1000098g0015 647 SMART HAMP_11 289 342 IPR003660 GO:0007165|GO:0016020
Bisa1000098g0015 647 SMART REC_2 1 112 IPR001789 GO:0000160
Bisa1000098g0015 647 MobiDBLite consensus disorder prediction 180 201 - -
Bisa1000098g0015 647 SUPERFAMILY CheY-like 1 122 IPR011006 -
Bisa1000098g0015 647 MobiDBLite consensus disorder prediction 212 226 - -
Bisa1000098g0015 647 Pfam Response regulator receiver domain 4 112 IPR001789 GO:0000160
Bisa1000098g0015 647 MobiDBLite consensus disorder prediction 379 394 - -
Bisa1000098g0015 647 PANTHER REGULATOR OF RPOS 1 141 IPR039420 -
Bisa1000098g0015 647 MobiDBLite consensus disorder prediction 505 524 - -
Bisa1000098g0015 647 Gene3D - 439 529 IPR036890 -
Bisa1000098g0015 647 Gene3D - 1 180 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa1000098g0015 1 118 Response Regulator Gene Family AT4G16110 26.667 8.54e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa1000098g0015 Response_reg 5.1e-24 CL0304