Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000077g0001 ATGGGAAAACCTATACCAAAAATTGGTTCACGTAGAAATGGACGTATTGGTTCACGTAAGAATGCGCGTAAAATACCAAAGGGAGTTATTCATGTTCAAGCTAGTTTTAACAATACCATTGTGACTGTTACAGATGTACGGGGTCAGGTGATTTCTTGGTCCTCCGCCGGTACTTGTGGATTCAAGGGTACAAGAAGGGGGACACCATTTGCCGCTCAAACCGCAGCAGGAAATGCTATTCGGACAGTAGCGGATCAAGGTATGCAACGAGCGGAAGTCATGATAAAAGGTCCCGGTCTCGGAAGAGATGCAGCATTAAGAGCTATTCGTAGAAGTGGTATACTATTAAGTTTCATACGGGATGTAACCCCTATGCCACATAATGGATGTAGGCCTCCTAAAAAAAGACGTGTGTAA 417 0.4412 MGKPIPKIGSRRNGRIGSRKNARKIPKGVIHVQASFNNTIVTVTDVRGQVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRTVADQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFIRDVTPMPHNGCRPPKKRRV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000077g0001 138 ProSitePatterns Ribosomal protein S11 signature. 106 128 IPR018102 -
Bisa1000077g0001 138 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 23 136 IPR001971 GO:0003735|GO:0005840|GO:0006412
Bisa1000077g0001 138 FunFam 30S ribosomal protein S11, chloroplastic 11 138 - -
Bisa1000077g0001 138 MobiDBLite consensus disorder prediction 1 22 - -
Bisa1000077g0001 138 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 7 138 IPR001971 GO:0003735|GO:0005840|GO:0006412
Bisa1000077g0001 138 Pfam Ribosomal protein S11 28 137 IPR001971 GO:0003735|GO:0005840|GO:0006412
Bisa1000077g0001 138 SUPERFAMILY Translational machinery components 23 138 - -
Bisa1000077g0001 138 Hamap 30S ribosomal protein S11 [rpsK]. 11 138 IPR001971 GO:0003735|GO:0005840|GO:0006412
Bisa1000077g0001 138 Gene3D Ribosomal protein S11 10 138 IPR036967 GO:0003735|GO:0005840|GO:0006412
Bisa1000077g0001 138 NCBIfam 30S ribosomal protein S11 19 135 IPR019981 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa1000077g0001 28 128 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 36.364 1.22e-13 62.0