Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000044g0032 ATGCTGGACACGCCCGGATCCCCTGATTTCATCGGCCAGGCGCTGCCCGCCCTGGAAGCGGTGGAAACCGTGGCGGTGGTGATCAACGCCCAGACCGGCATCGAGCTGATGGCGCTGCGCATGATGGAAGCGGCCGCCCGTCGCGGGCTCACCCGTCTGCTGGTCATCAACAAGATCGACGCCCCAGGGGGTGGCACACGGGTGGTGGACTGCTTCTTCGGCACCGACGGCGAGTCCGATTTCGGGTCGGTGGCGGACGCGCATCGCGCCCTGGTGGAGCAGGTGGTCGAGGTGGATCCCGCCTTCGTGGACCGCTACCTCAATGACGGCGACGTGCCCGCCACCGAACTGCATGCGCCGCTGGAACAGGCGCTGCGGGAGGGGCATCTGATCCCCGTGTGTTTTGTCTCCGCCCGCAGCGGTGCCGGCGTGGCGGAGCTGCTCGGCGTGATCGAGAAGCTGCTGCCCAATCCTTCCGAAGCCAATCCGCCGCAGTTCCTGCAGGGCGAGGGCGAACAGGCGGTGCCGCTGCAGGTGGCGATGGATCCGGAGCGGCATGTGGTGGCGCATGTGTTCAAGATCCTGTCCGACCCCTACCTCGGCAAGCTGGCGATGGTGCGGGTGCATCAGGGCACGCTGCGACGCAATGCGCAGGTGTTCGTCGGCCATGCCCGCAAGCCGGTGCGGCTGGCCCACCTGCTGCGACTGCAGGGTCGGCAGCATGTGGAGATCGACCAGGCGATGCCGGGCGAGTTGTGCGCCCTGGCCAAGCTGGACGACCTGCACTTCGACGCGGTGCTGCATGACGCGCCCGAAGACGAGCATCTGCATCTGAGCCCGGTCGAGCTGCCGGTGGCCGTGCATGGCCTCAGCCTGCGGCCCACCCGTCATGGCGACGAGCAGCGCTACGCGGACGCCGGGTCCGGCGCGGGGGCGGGCAATGCGCAGGGGGGCGAGACGCTGGTCTACGGGCTCGGCGACCTGCATCTGCGGTGTCTGCTGGAGCGGCTGAAGGATCCGTACAAGGTGGAGGTGGTGGCTCAGCCGCCCCGCGTCGCGTACCGGGAGACGATCGCGGCCGCGGCGGAGGGTCACCATCGGCACAAGAAACAGACCGGCGGCGCGGGGCAATTCGGCGAGGTCTGGCTGCGGGTGGAACCGCTAGCCCGGGGCGCCGGCTTCGAGTTCCGGGATGAGGTCAAGGGCGGCGCCATCCCCGGCGCGTTCATGCCCGCCGTCGAAAAGGGCGTGCGGCAGGCGCTGGCTCGCGGCGTGGTGGCGGGTTATCCGTTGCAGGACCTGCGGGTGACGGTGCTGGATGGCAAGCACCACACGGTGGATTCCAAGGAGGTGGCCTTCATCACTGCCGCCCGCAAGGCCCTGGTGGCGGCGGTGAAGGAGGCTCGCCCGCTGGTGCTGGAGCCGATCGTGACGGTGGAGATCACCGCACCGGAATCGGCCACCGGCGATATCACCGGCGACCTGGCCGCACGCCGCGGGCAGGTCAGCGGCACCCGCAGCCCGGTGACGGGCCAGATCGTGGTGCTGGGCTCGGCGCCGCTGGCCGAGCTGTCGGCCTACCAGAATCGGCTCAATGCGCTGACCAGCGGCCAGGGGCGCTACACGCTGGCGTTTTCGCATCACGAGCCGGTGCCGCCGTCGGTGCAGGCGCAACTGGTCTCGCAACATCGGGTGCAGGACGACGACTAG 1710 0.6947 MLDTPGSPDFIGQALPALEAVETVAVVINAQTGIELMALRMMEAAARRGLTRLLVINKIDAPGGGTRVVDCFFGTDGESDFGSVADAHRALVEQVVEVDPAFVDRYLNDGDVPATELHAPLEQALREGHLIPVCFVSARSGAGVAELLGVIEKLLPNPSEANPPQFLQGEGEQAVPLQVAMDPERHVVAHVFKILSDPYLGKLAMVRVHQGTLRRNAQVFVGHARKPVRLAHLLRLQGRQHVEIDQAMPGELCALAKLDDLHFDAVLHDAPEDEHLHLSPVELPVAVHGLSLRPTRHGDEQRYADAGSGAGAGNAQGGETLVYGLGDLHLRCLLERLKDPYKVEVVAQPPRVAYRETIAAAAEGHHRHKKQTGGAGQFGEVWLRVEPLARGAGFEFRDEVKGGAIPGAFMPAVEKGVRQALARGVVAGYPLQDLRVTVLDGKHHTVDSKEVAFITAARKALVAAVKEARPLVLEPIVTVEITAPESATGDITGDLAARRGQVSGTRSPVTGQIVVLGSAPLAELSAYQNRLNALTSGQGRYTLAFSHHEPVPPSVQAQLVSQHRVQDDD 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000044g0032 569 Pfam Elongation factor G, domain IV 350 468 IPR005517 GO:0005525
Bisa1000044g0032 569 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 157 IPR027417 -
Bisa1000044g0032 569 FunFam Elongation factor G 475 546 - -
Bisa1000044g0032 569 SUPERFAMILY Translation proteins 141 277 IPR009000 -
Bisa1000044g0032 569 SUPERFAMILY Ribosomal protein S5 domain 2-like 350 470 IPR020568 -
Bisa1000044g0032 569 SUPERFAMILY EF-G C-terminal domain-like 474 564 IPR035647 -
Bisa1000044g0032 569 Gene3D Elongation Factor G (Translational Gtpase), domain 3 313 354 - -
Bisa1000044g0032 569 Pfam Elongation factor G C-terminus 472 558 IPR000640 -
Bisa1000044g0032 569 PANTHER TRANSLATION ELONGATION FACTOR G-RELATED 84 563 - -
Bisa1000044g0032 569 SMART EFG_IV_2 351 469 IPR005517 GO:0005525
Bisa1000044g0032 569 CDD EFG_mtEFG1_IV 354 469 IPR005517 GO:0005525
Bisa1000044g0032 569 Gene3D - 1 169 IPR027417 -
Bisa1000044g0032 569 FunFam Elongation factor G 356 486 - -
Bisa1000044g0032 569 Gene3D Translation factors 170 294 - -
Bisa1000044g0032 569 CDD EFG_mtEFG_C 474 552 IPR035649 -
Bisa1000044g0032 569 Pfam Elongation factor Tu GTP binding domain 2 156 IPR000795 GO:0003924|GO:0005525
Bisa1000044g0032 569 Gene3D - 475 546 - -
Bisa1000044g0032 569 Gene3D - 355 559 IPR014721 -
Bisa1000044g0032 569 SMART EFG_C_a 471 559 IPR000640 -
Bisa1000044g0032 569 SUPERFAMILY EF-G C-terminal domain-like 315 352 IPR035647 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa1000044g0032 282 560 Eukaryotic Initiation Factors Gene Family AT1G56070 24.545 2.23e-12 68.2