Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2792 ATGGAGATGCAACAGCTTCTGAGCATGGGGTTCCCAGACGAGTTAGCCGCCCAAGCCTTGGCCGCTACCGGGGGCAAATCCACTATTAAAGCCACCGAATGGATCTTGAACCACAAAACCACTTCCACTTCTAACTCAACAAACCCTTCTCCAGTTCAGCCTAAGCTCGACCGCTTCTTCCAGTTTCAATCCAAGCCCACAGCCACAACACAAGCAGTACAACAGCAAGAAGGAGAGGATGCAGATTTAGATTTGAAAGAATCAACCTTAAACCCTAATCCATCATCAACCAAACGTCTGAAACCTTCAACGTCTAATACCACCAAACCCCTTTCTTCTGCCTTCTTTTCCAATCATTTGCGTCGTCCAAAGATTGAGGCCCACGAGCCCTTATATGAGCGAATGCGTCCAAGAACCATCGATGATGTTATCGGCCAAGACCATCTGCTAGCAGAGAATTCGCTCCTTCGCTCGGCGATTGAGCGGGAGCGTCTCCCTTCCATCATCTTCTGGGGCCCTCCTGGCACTGGTAAGACTTCTATTGCCAAAGCCATTGTTAATTCACATAAACAACAACAACAACAACAACAACAATGCCCTTGTTATCGCTTTGTTTCGTTATCTGCTGTGACTAGCGGTGTAAAAGATGTGAGGGATGTGGTTGATGAGGCTAGGAAATCGAGAGTTAAAGGCAATCAAAGAACTGTTTTGTTTGTGGATGAGGTTCATAGGTTCAACAAATCTCAACAGGACTCTTTTTTGCCGGTTATTGAAGATGGGAGTATTGTCTTCATTGGGGCCACTACTGAGAACCCTTCTTTCCATTTAATTAGACCATTGCTGTCTCGATGTCGTGTACTTACCCTAAACCCCTTGAAACCCCACCATGTTGCAATGATTCTAAAGAGGGCTGTGAATAATTCGGATAGAGGATTGGTGCAGAGTGTTGGTTCTCAAGTTGATGTAACCGAGGATGTACTTAATTATATGGCCAACAATTGTGATGGTGATGCTCGTGTGGCATTGAACGCCTTGGAGATAGCAGCTATCACAGCAGCTGCCCGGTCAGAAGATGTTAAGCAATTTAACGAGGTCAATGAAACGGAAGGCAAAGATAGTCAGATAAACCATGAAAACAGGGTTGGTCCATCTGTTAATGTTGTTACCCTTGACGATGCAAAGGAGGCATTTCAGTGCAAGCACCTTGCTTATGATAGAGCTGGGGAAGAGCACTATAATCTAATTAGTGCACTGCACAAATCAATGAGGGGAAGTGATGCTGATGCTGCAATTTATTGGTTGGCAAGAATGGTGGAAGGAGGCGAAGAGCCTCTTTACATTGCTCGGAGACTGATACGGTTTGCAAGTGAGGATGTTGGGTTGGCTGATCCATCTGCTCTCACTCAGGCAGTATCATGCTACCAAGCCTGCCACTTTTTGGGCATGCCTGAGTGCAATGTGATTCTTGCACAGTGTGTTGCTTACTTGGCCTTAGCTCCTAAATCTATCTCTGTCTATAGAGCAATAGAAGCTGCTCAGAAGGTTGTGAGGGAATCAGTTGGACAGAATGAAGGAGTGCCTCTTCATCTGAGGAATGCACCAACTAAACTAATGAAGGAACTCGGTTACGGGAAGGGATATGTATATCCTCCTGATAATCCCTCTTTGACACAGAGCTACTTACCACCCTCACTAAATGGGTACAAATTCCTTGATTGGCCTCACAGGAATATCTCTGATGGGTAA 1746 0.4559 MEMQQLLSMGFPDELAAQALAATGGKSTIKATEWILNHKTTSTSNSTNPSPVQPKLDRFFQFQSKPTATTQAVQQQEGEDADLDLKESTLNPNPSSTKRLKPSTSNTTKPLSSAFFSNHLRRPKIEAHEPLYERMRPRTIDDVIGQDHLLAENSLLRSAIERERLPSIIFWGPPGTGKTSIAKAIVNSHKQQQQQQQQCPCYRFVSLSAVTSGVKDVRDVVDEARKSRVKGNQRTVLFVDEVHRFNKSQQDSFLPVIEDGSIVFIGATTENPSFHLIRPLLSRCRVLTLNPLKPHHVAMILKRAVNNSDRGLVQSVGSQVDVTEDVLNYMANNCDGDARVALNALEIAAITAAARSEDVKQFNEVNETEGKDSQINHENRVGPSVNVVTLDDAKEAFQCKHLAYDRAGEEHYNLISALHKSMRGSDADAAIYWLARMVEGGEEPLYIARRLIRFASEDVGLADPSALTQAVSCYQACHFLGMPECNVILAQCVAYLALAPKSISVYRAIEAAQKVVRESVGQNEGVPLHLRNAPTKLMKELGYGKGYVYPPDNPSLTQSYLPPSLNGYKFLDWPHRNISDG 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2792 581 Gene3D - 121 290 IPR027417 -
Bisa09g2792 581 MobiDBLite consensus disorder prediction 88 111 - -
Bisa09g2792 581 FunFam Replication-associated recombination protein A 123 291 - -
Bisa09g2792 581 Pfam ATPase family associated with various cellular activities (AAA) 168 286 IPR003959 GO:0005524|GO:0016887
Bisa09g2792 581 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 367 IPR027417 -
Bisa09g2792 581 Gene3D - 292 365 - -
Bisa09g2792 581 SUPERFAMILY post-AAA+ oligomerization domain-like 408 576 IPR008921 GO:0003677|GO:0006260
Bisa09g2792 581 FunFam AAA-type ATPase family protein 292 367 - -
Bisa09g2792 581 SMART uba_6 1 37 IPR015940 -
Bisa09g2792 581 Gene3D - 2 51 - -
Bisa09g2792 581 SMART AAA_5 164 292 IPR003593 GO:0016887
Bisa09g2792 581 Pfam AAA C-terminal domain 318 423 IPR032423 -
Bisa09g2792 581 Pfam MgsA AAA+ ATPase C terminal 424 571 IPR021886 -
Bisa09g2792 581 SUPERFAMILY UBA-like 3 40 IPR009060 GO:0005515
Bisa09g2792 581 CDD HLD_clamp_RarA 292 359 - -
Bisa09g2792 581 Gene3D - 502 579 - -
Bisa09g2792 581 FunFam Putative AAA family ATPase 398 501 - -
Bisa09g2792 581 Pfam UBA/TS-N domain 4 35 IPR015940 -
Bisa09g2792 581 CDD AAA 144 285 - -
Bisa09g2792 581 Gene3D - 398 501 - -
Bisa09g2792 581 PANTHER WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER 1 577 - -
Bisa09g2792 581 MobiDBLite consensus disorder prediction 77 111 - -
Bisa09g2792 581 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 1 38 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2792 Bisa-ChrBisa09 61227106 61228851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2792 123 292 Core DNA Replication Machinery Family AT1G21690 25.556 1.73e-09 57.8