Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2778 ATGAAGAGAGAGCGAAGGATATTATTATGGTCAGAAGAAGCACATGGCATGGTGGGGGTTATGAGTTTTGTCATTTTTCATGTAATAGGAATAGCGATGAGTGCGTCAGAGTCAGGTGCTGGAGAAGTTGAATCATTGATGAGCTTTAAGCAGTCGTGTGTTTCCTCTGATCCGCAGAATTTCCTTGCTGACTGGACTGCTGATTCTGCAACCCCCTGCTCCTGGAGAGGTGTCTCCTGTTCTCCCCATGGCCTTGTCACTACTCTCAACCTCACTGACGCTGGCCTTGTTGGCACCTTACACCTTCCTCGTCTCACGGCTTTGCCTGCTCTCGGCCATCTCCTCCTGCATGCCAATTCCTTCACCATTAATGCCCGCACCGATTCCTCTCCCACCTCCTCCTGCTCTCTTGAGACTCTTGACCTCTCCGCCAACGACTTGATTGGCCCTTTCACAGACATGATTCTGTCATATTCTCTCTCCAACTGTCACAGTTTGGCCCTGCTAAATCTCTCTCGCAATCACCTCACTGCCCCATTCAACATATCTCTTTTGCCTCTAAAGCACCTGGATCTCTCCAGCAACAATTTCTCGGGAAAGTTCTCTGAGGTCGCCGATTTTGGCCACTGCACCACTCTCATTTCGCTGCGTCTGTCTCACAACGCGCTCTCTGGCTCTGTGTTCCCATCGAGCCTCAGCAACTGTCAGGCTCTCCAGATTCTGGATCTATCCTACAACCAACTCCAGTCCGAAATTCCAGGTGACTTACTGGGGAGTCGTCTCAAGAGTTTGAAGCGACTGTTTCTAACCCATAATCAGTTCTCTGGAGAAATACCTGCTGAATTGGGAGCATCTTGTGGGTCCCTCGTGGAGCTTGATCTGTCCGATAACAAACTTTCCGGTGAGTTGCCTGACACCTTTGCGACGTGCTCTTCTTTGCAGAGTCTCAACCTTGGCAAGAATAATCTCACTGGAGACTTCCTCGCTTCTGTCGTCACCAACCTTTCAAGTCTCAAGTATCTGTACGTACCATTCAATAACATAACTGGGCCTCTTCCTTTATTATCTCTTGCCAATTGTACACAGCTTCAGGTGCTTGATCTCAGTTCTAACGCCATCACAGGCAACATTCCTTCCGCCTTCTGCTCTTCCTCTTCTTCTTTGGAAAAGATACTCTTAGCTGGCAATTACCTTTCGGGAACAGTCCCCGCAGAGCTGGGCAGATGCAACAACTTGAGGAAAATTGATTTCAGCTTTAATAATTTAAACGGCGCAATACCCTTGGAAATTTGGTTCTTGCCAAATCTTTCTGACTTGATTATGTGGGCAAACAACCTCTCAGGCGAAATCCCTGAAGGTATCTGTGTCAAGGGAGGAAACTTACAGACTCTAATTCTCAACAACAATTTCATCTCAGGCACCATTCCTGAATCAATATCCAACTGCACCAACATGATTTGGATCTCACTCGCAAGCAATCGGATTACCGGGGAGATCCCGGCTGCGATTGGGAATTTAAAAGAACTTGCAATCCTCCAATTGGGTAATAATTCACTCACGGGACAAATCCCACCGGAGCTCGGGAAATGCGGGAGCCTCATATGGCTAGATTTGACTAGTAACAACCTGAGTGGTTCTATACCGTCTCATCTTGCCGATCAAGCGGGCTTGATCGTTCCGGGCAGTGCGTCGGGGAAGCAGTTCGCATTTGTGAGGAACGAAGGCGGAACAAGCTGCAGGGGTGCTGGAGGGTTGGTTGAATTTGAGGATATGAGGGCGGAGAGGCTGGAAAATTCTCCTATGGTTCATTCCTGCCCTTTGACAAGAGTGTACTCTGGTACCACAGTTTATACCTTCACCAACAATGGCAGCATGATTTACCTTGATCTCTCCTACAATTCCCTGTCAGGGAGTATTCCTGAAAGTTTTGGTGCAATGGCCTTTTTGCAGGTCTTAAATGTGGGACACAATAGGCTAAGTGGAAACATACCTGACAGTTTTGGTGGTCTGAAAGATTTAGGAGTGCTGGATCTCTCCCATAATAATCTCCAGGGGTTCATCCCGGGGTCATTAGGGATGCTATCTTTTCTCAGTGATCTTGATGTGTCAAACAATAACCTCACAGGCTCCATTCCTACTGGAGGCCAGCTAATCACCTTCTCTCCATCTAGATATGCAAACAACTCCGGGCTTTGTGGGGTCCCGTTAACGCCTTGTGGCTCTGCAACTCACAATTCAGGTCTTCAAAAGAAGAAGCACCCTTTGTCGTTAGGGATCGCAATTGGCCTCGTTCTCTCCCTCTTTTGTGTTTTGGGGATCGTATTGACTCTTTATCTAGTAAAAACGTACCCTAGGAGGGATGGACAGAGAGAAAAATACATAGAAAGTCTCCCAACTTCAGGGTCCAGCAGCTGGAAACTTTCTAGCATTCCTGAGCCTCTGAGCATCAATGTTGCCACCTTTGAGAAACCTTTGCGAAAGTTGACATTTCGCCATCTTCTCGAGGCTACCAACGGTTTCAGTGCTGAAAGCTTGATAGGGTCTGGAGGGTTTGGAGAAGTGTACAAAGCTCAGCTTAGAGATGGGTGTGTTGTTGCCATCAAGAAGCTTATTTACGTCACAGGTCAAGGAGACAGGGAGTTCATGGCTGAAATGGAAACTATTGGAAAGATTAAGCACCGAAACCTGGTTCCTCTGTTGGGCTACTGCAAGATAGGAGAGGAGAGGCTTCTTGTGTATGAGTACATGAAGTGGGGGAGTCTGGAGGCTGTTCTTCATGATAGGGCCAATCCCAAAGGAGGAGGTTCAAAGCTGGATTGGGCAAAGAGAAGGAAGATCGCCATAGGGTCTGCAAGAGGTCTTGCGTTTCTTCATCATAGCTGTATACCGCATATTATACACCGTGACATGAAGTCTAGCAATGTTCTGCTTGATGAGAACTTTGAGGCCAGAGTTTCAGATTTTGGGATGGCGAGATTGGTGAATGCCCTTGACACTCATCTCAGTGTGAGCACACTTGCAGGAACGCCAGGTTATGTGCCACCGGAATACTACCAGAGTTTCAGATGCACAACGAAAGGGGATGTATATAGTTATGGTGTCATACTGTTAGAGCTTCTCTCGGGGAAGAGGCCGATCGACTCGTCGGAGTTTGGGGATGACAACAATCTGGTTGGATGGGCAAAGCAGCTTCAAAGAGAGAAAAGAATGAATGAGATACTAGATCCTGATTTGGTTATGCAGACATCCAATGAAAGTGAACTATATCAGTATCTGAGAATTGCATTTCTATGTGTAGATGACAGGCCTTCTCGACGGCCAAACATGATACAAGTTATGGCAATGTTTAAAGAGCTTCAGGTTGACACTGAAAACGACATCCTCGACGGCTTGTCGTTGGACGACTCTGTTATTGACGAATAA 3423 0.4715 MKRERRILLWSEEAHGMVGVMSFVIFHVIGIAMSASESGAGEVESLMSFKQSCVSSDPQNFLADWTADSATPCSWRGVSCSPHGLVTTLNLTDAGLVGTLHLPRLTALPALGHLLLHANSFTINARTDSSPTSSCSLETLDLSANDLIGPFTDMILSYSLSNCHSLALLNLSRNHLTAPFNISLLPLKHLDLSSNNFSGKFSEVADFGHCTTLISLRLSHNALSGSVFPSSLSNCQALQILDLSYNQLQSEIPGDLLGSRLKSLKRLFLTHNQFSGEIPAELGASCGSLVELDLSDNKLSGELPDTFATCSSLQSLNLGKNNLTGDFLASVVTNLSSLKYLYVPFNNITGPLPLLSLANCTQLQVLDLSSNAITGNIPSAFCSSSSSLEKILLAGNYLSGTVPAELGRCNNLRKIDFSFNNLNGAIPLEIWFLPNLSDLIMWANNLSGEIPEGICVKGGNLQTLILNNNFISGTIPESISNCTNMIWISLASNRITGEIPAAIGNLKELAILQLGNNSLTGQIPPELGKCGSLIWLDLTSNNLSGSIPSHLADQAGLIVPGSASGKQFAFVRNEGGTSCRGAGGLVEFEDMRAERLENSPMVHSCPLTRVYSGTTVYTFTNNGSMIYLDLSYNSLSGSIPESFGAMAFLQVLNVGHNRLSGNIPDSFGGLKDLGVLDLSHNNLQGFIPGSLGMLSFLSDLDVSNNNLTGSIPTGGQLITFSPSRYANNSGLCGVPLTPCGSATHNSGLQKKKHPLSLGIAIGLVLSLFCVLGIVLTLYLVKTYPRRDGQREKYIESLPTSGSSSWKLSSIPEPLSINVATFEKPLRKLTFRHLLEATNGFSAESLIGSGGFGEVYKAQLRDGCVVAIKKLIYVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLEAVLHDRANPKGGGSKLDWAKRRKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDSSEFGDDNNLVGWAKQLQREKRMNEILDPDLVMQTSNESELYQYLRIAFLCVDDRPSRRPNMIQVMAMFKELQVDTENDILDGLSLDDSVIDE 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2778 1140 SMART serkin_6 840 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g2778 1140 SUPERFAMILY L domain-like 385 721 - -
Bisa09g2778 1140 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 333 1117 - -
Bisa09g2778 1140 SUPERFAMILY Protein kinase-like (PK-like) 821 1116 IPR011009 -
Bisa09g2778 1140 ProSiteProfiles Protein kinase domain profile. 840 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g2778 1140 SMART LRR_typ_2 261 285 IPR003591 -
Bisa09g2778 1140 SMART LRR_typ_2 506 530 IPR003591 -
Bisa09g2778 1140 SMART LRR_typ_2 360 384 IPR003591 -
Bisa09g2778 1140 SMART LRR_typ_2 459 482 IPR003591 -
Bisa09g2778 1140 SMART LRR_typ_2 694 717 IPR003591 -
Bisa09g2778 1140 SMART LRR_typ_2 670 693 IPR003591 -
Bisa09g2778 1140 SMART LRR_typ_2 286 309 IPR003591 -
Bisa09g2778 1140 SMART LRR_typ_2 646 669 IPR003591 -
Bisa09g2778 1140 SMART LRR_typ_2 433 457 IPR003591 -
Bisa09g2778 1140 SMART LRR_typ_2 235 259 IPR003591 -
Bisa09g2778 1140 FunFam Brassinosteroid LRR receptor kinase 916 1121 - -
Bisa09g2778 1140 FunFam Leucine-rich repeat receptor-like protein kinase TDR 307 559 - -
Bisa09g2778 1140 FunFam serine/threonine-protein kinase BRI1-like 2 801 915 - -
Bisa09g2778 1140 ProSitePatterns Serine/Threonine protein kinases active-site signature. 965 977 IPR008271 GO:0004672|GO:0006468
Bisa09g2778 1140 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 617 739 - -
Bisa09g2778 1140 Gene3D Ribonuclease Inhibitor 41 158 IPR032675 -
Bisa09g2778 1140 SUPERFAMILY L domain-like 65 255 - -
Bisa09g2778 1140 PRINTS Leucine-rich repeat signature 289 302 - -
Bisa09g2778 1140 PRINTS Leucine-rich repeat signature 670 683 - -
Bisa09g2778 1140 Pfam Leucine rich repeat 649 707 IPR001611 GO:0005515
Bisa09g2778 1140 Pfam Leucine rich repeat 460 519 IPR001611 GO:0005515
Bisa09g2778 1140 Pfam Leucine rich repeat 288 348 IPR001611 GO:0005515
Bisa09g2778 1140 Gene3D Transferase(Phosphotransferase) domain 1 916 1132 - -
Bisa09g2778 1140 ProSitePatterns Protein kinases ATP-binding region signature. 846 869 IPR017441 GO:0005524
Bisa09g2778 1140 Gene3D Ribonuclease Inhibitor 186 740 IPR032675 -
Bisa09g2778 1140 SUPERFAMILY L domain-like 187 452 - -
Bisa09g2778 1140 Pfam Brassinosteroid receptor island domain 556 620 IPR045381 -
Bisa09g2778 1140 Gene3D - 563 620 - -
Bisa09g2778 1140 Gene3D Phosphorylase Kinase; domain 1 803 915 - -
Bisa09g2778 1140 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Bisa09g2778 1140 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 204 302 - -
Bisa09g2778 1140 Pfam Leucine Rich repeat 360 376 IPR001611 GO:0005515
Bisa09g2778 1140 Pfam Protein tyrosine and serine/threonine kinase 843 1114 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2778 Bisa-ChrBisa09 60871984 60875406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2778 42 1140 Receptor kinase-like Gene Family AT1G55610 65.229 0.0 1455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bisa09g2778 PK_Tyr_Ser-Thr 2.7e-43 CL0016