Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2767 ATGGACATGGCAAGCATTCGTCTGAGTGACTCATCGGACCCACTTGGCTGGGGCGTGGCCGCGGACTCTCTCAAGGGCAGCCACTTGGATGAAGTAAAGCGCATGGTGGCGGACTACCGGAGACCCGTCATCCGTCTCGGCGGTGGCGAAGCGCTCTCCGTCTCGCAGGTGGCGGCGCTGGCTTACCGTGACTCTCAAGTGAAGGTTGAGCTGTCGGAGTCTGCAAGAGCAGGCGTCCAGGCAAGCAGCGAGTGGATCATGGAAAGCGTAAACAACGGCACTGCCATCTACGGTGTGACCACTGGCTTTGGTGCCGCCTCCCATAAGCGAACCACACAGGTTGCTGCCCTTCAGAAGGAGCTAGTTAGGTTTTTGAACTGTGCAATATTTGGAAAGGGGAAGGAGTTGTTTCACACCTTGCCTCAGCCAGCAACCAGAGCAGCCATGGTCGTGAGAGTGAACACACTTCTTCAAGGGTATTCAGGCATCAGATTTGAAATCCTTGAGGCCATCGCCAAACTCCTCAACCACAACATCACTCCATGCTTGCCACTTCGCGGTACAGTCACTGCCTCTGGTGATCTCATCCCTCTTTCCTATATTCTTGCTCTGCTTGTTGGAAGGCCAAATTCTCGAGCTGTTGGACCATCTGGAGAGTTCCTTAATGCTAATGAAGCTTTCCTTTTGGCCAATATCAATTCTGGCTTCTTTCAATTGCAGCCCAAGGAGGGCCTTGCTCTTGTCAACGGCACCGCCGTTGGATCCGGCTTGGCTTCCATGGTGCTTTTTGAAGCCAACATATTAGCTTTATTGTCGGAAGTTTTATCAGCCATTTTTGCTGAAGTAATGCATGGGAAGCCAGGATTCACACATCATATGATACATAAGCTTAAGCACCATCCTGGTCAAATTGAAGCTGCTGCAATTATGGAACACATTTTAGATGGAAGCTCCTATGTCAACGATTTACAACAGATGGATCCGTCGCAAAGTAAGCCTAAAAAAGAACGATATGCTCTTATAACTTCCCCTCAATGGCTTGGTCCACAGATTGAAGTCATCAGATATTCCACTAAATCCATTGAAAGGGAGATAAACTCAGTGAACGACAATCCTTTGATTGACGTTTCAAGGAACCAGGCTTTACATGGTGGTAATTTCCAAGGAACACCCATTGGAGTTTCCATGGACAATGCACGTTTAGCTGTTGCTTCCATAGGCAAACTCGTGTTTGCCCAATTCACTGAGCTTGTAAATGACATGTACAATAATGGGTTGCCATCAAACCTCTCTGCTGGTAGAAACCCAAGTTTGGATTATGGCTTTAAGGCATCTGAAGTTGCCATGGCGTCTTATTGTTCTGAACTTCAATTTTTGGCAAATCCAGTGACGACTCATGTGCAAAGTGCAGAGCAACACAATCAAGATGTGAACTCATTGGGTTTGATTTCTGCAAGAAAAACTAGTGAAGCTATTGAGATCTTGAAGCTCATGTGTTCCACCTACTTGGTTGCACTATGCCAAGCTATTGACTTGAGGCACTTGGAGGAAATTTTTAAGAACACAGTCAAGAATACTGTAAGTCAGGTTGCAAAGAAGATTCTAGTCACAGGGGATAATATAAGTGAACTACAAATTAACGCATTTGTATTTTGTGAGAAAGATCTAGTCAAAGTGGTTGATAGAGAGTATGTATTTACCTACATTGACGATCCCTGCAATGCTGCGTATCCATTGATGCCAAAACTAAAACAAGTACTTTATGAGAAAGCACATATGGACGCCGTTAATGAGAAGAATGTCATAAGCAGTACTAGTTCAGTTTTTGAGAAGATTGGAGAATTTGAGGAGGAATTGAAGTGTGTGCTGCCAAAGGAAGTGGAAAGTGCAAGGGTGAATTATGAGAATGGCAACCCAGTAGTTCCAAATAGAATTAAGAAGTGCAGGTCTTACCCATTGTACAAGTTTGTGAGGTTAGAGTTGGGGACTGGGTTACTGTCTGGAGAAAACACCAAGTCACCAGATGATGACTTTGATAAAGTGTTTACAGCAATTTGTGAAGCAAGGATTGTTGATCCACTTTTGGAATGCCTTGCAGATTGGAAAGGAGTTCCCATCCAAATATAA 2127 0.4513 MDMASIRLSDSSDPLGWGVAADSLKGSHLDEVKRMVADYRRPVIRLGGGEALSVSQVAALAYRDSQVKVELSESARAGVQASSEWIMESVNNGTAIYGVTTGFGAASHKRTTQVAALQKELVRFLNCAIFGKGKELFHTLPQPATRAAMVVRVNTLLQGYSGIRFEILEAIAKLLNHNITPCLPLRGTVTASGDLIPLSYILALLVGRPNSRAVGPSGEFLNANEAFLLANINSGFFQLQPKEGLALVNGTAVGSGLASMVLFEANILALLSEVLSAIFAEVMHGKPGFTHHMIHKLKHHPGQIEAAAIMEHILDGSSYVNDLQQMDPSQSKPKKERYALITSPQWLGPQIEVIRYSTKSIEREINSVNDNPLIDVSRNQALHGGNFQGTPIGVSMDNARLAVASIGKLVFAQFTELVNDMYNNGLPSNLSAGRNPSLDYGFKASEVAMASYCSELQFLANPVTTHVQSAEQHNQDVNSLGLISARKTSEAIEILKLMCSTYLVALCQAIDLRHLEEIFKNTVKNTVSQVAKKILVTGDNISELQINAFVFCEKDLVKVVDREYVFTYIDDPCNAAYPLMPKLKQVLYEKAHMDAVNEKNVISSTSSVFEKIGEFEEELKCVLPKEVESARVNYENGNPVVPNRIKKCRSYPLYKFVRLELGTGLLSGENTKSPDDDFDKVFTAICEARIVDPLLECLADWKGVPIQI 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2767 708 Pfam Aromatic amino acid lyase 52 521 IPR001106 -
Bisa09g2767 708 Gene3D - 516 643 IPR023144 -
Bisa09g2767 708 Gene3D - 5 251 IPR024083 -
Bisa09g2767 708 Gene3D Fumarase/aspartase (Central domain) 252 703 - -
Bisa09g2767 708 SUPERFAMILY L-aspartase-like 13 707 IPR008948 GO:0003824
Bisa09g2767 708 NCBIfam phenylalanine ammonia-lyase 13 698 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bisa09g2767 708 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 187 203 IPR022313 GO:0016841
Bisa09g2767 708 FunFam Phenylalanine ammonia-lyase 5 251 - -
Bisa09g2767 708 CDD PAL-HAL 50 513 IPR001106 -
Bisa09g2767 708 PANTHER HISTIDINE AMMONIA-LYASE 11 708 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2767 Bisa-ChrBisa09 60518717 60523026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2767 10 708 Monolignol Biosynthesis Gene Families AT2G37040 71.937 0.0 1068