Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2731 ATGGTTACCCTTCTTCGATGCTGCCCCTCTCCCCCATGTGCTTTTTCCTTAATGGATGAATGGTTTAAAACTGTCGTGATTTCAGGTATTGAACTAGAAAGTGAGATTAAAAGAAATTTCAAGTTTGTTAAGTTGTATAGTTTCCTCTTCCAAGTTCAAACCCCAAATTTCTTTCATTCCCGTTGGCCGGCTCTGTTCTTTGTTCTTTTTGCCGGTCTAAACCCTAGCACCGGCCAGGTTAGAACCGGAGAGAATCCTGTTTTAGGATCTAATCTTGTTCTTCCTTTTCCTCTTCGATCCTGTTCCAAACTCCAATCGTTGAGCTCGACTTGGGTTTTTCGGGGGTTTCTTTGCTGAAAAATTGAACGGATGTTTGAGCTATATTACATGGTCACTGGAGATGAGTTTTGTGGCCCTGCCTCTGCCTTATATCTGGCTAAGACTGATGACTCTATTCTTACTGACAAAGTAAAACTTTTGATGGGTGCGTCGTCCGGCTCCAACATCAACCAGCAGCTTTCTTCAAAAATGCTACCTCCACGTCAGCAATCACGTGTTGGAGGACTACAAACTTCGCTATCCCTAGTTTCTTCAGATCCTCGCCTCTCTCCTGAGGAACCTAGATCTACCTCTGACAATATTCGAGAATCTCCTACTGAAAGTGCCAGTTCTAGAGAAACTTGGCCAACTGCAGATGCTATTGCAGCAAAAAAGATGGAGAATGGGAAAGCAGAGAATGATTGCCCTGAGCAGTCTGTAATCCGTCGTGTTTCTAGTGCAGACAAAATCACTCTTCAGGACGTAGCAAGAGAAAGAGTTGATATAATTTCTGAAAAGATGCATCATCTACCTGAAGATTTTCTAGAAGAGCTGAAGAACACTCTTCGAGTTATCCTTGAGGGAGGGAATGGTTCACAGCACAGGGATGAATTTTTCATTTTGCAGAAGCTTGTTCAGAGTAGAACTGATTTAACAGCCAAGACTTTGATTAGAGCACATCGTGTGCAGCTTGAAATCCTTGTTGCAATAAATACTGGAATTCAGGGATTTTTACATCCTAACATCAGTCTCTCACAAACTTCCCTCATTGAGATCTTTGTGTACAAGAGATGCAGAAATATAGCTTGTCAAAACCAACTTCCAGCTGATGATTGTACCTGTGAAATATGCACTAACAGAAATGGTTTCTGCAATCTTTGCATGTGTGTAGTCTGCAACAAATTTGACTTTGAAGTAAATACATGCCGCTGGATTGGATGTGATTTATGTTCTCATTGGACTCATACAGACTGTGCAATTCGGGATCAACTTATTTGCATGGGCCCTTCTGCAAAGAGTGGATCAGGACCAAGCGAAATGGTTTTTAGGTGTCATGCATGCAAGAGGACTTCAGAGCTGTTTGGTTGGGTTAAAGATGTTTTCCAGCATTGTGCACCATCCTGGGATGGAGAGGCCTTAATGAGGGAACTTGATTTTGTTAGTAGGATCTTCCAAAGTAGTAAAGACCCACGAGGAAGGAAACTATTATGGAAGTGTGATGATCTAAAGGACAAGATGAGAGGTGGAACATTGGAACCAAATGCGGCTTGCCGGGCAATATTGATGTTTTTCCAAGAGCTTGAGGTGGACTCCCCAAAGAGCCTGGAAAATGGAGAAAGTGGAAGGCTGATTGCTCCACAGGAGGCATGCAATAGAATTGCTGAAGTAGTGCAGGAGGCTATCAGAAAGATGGAAATGGTAGCTGATGAGAAGATGAGAATGTTCAAGAAGGCTGGCTTGGCACTTGAGGCTTGTGAGCGAGAATTAGCAGACAAGGCAAGGGAGGCAGCAGAACTCAAGATGGACAGGCAAAAAAAGAAACTACAAATAGAAGAACTGGATAGAATTGTGAGGCTTAAAACTGCAGAGGCTGATATGTTCCAGTCTAAGGCTAATGAGGCTAAACGAGAGGCTGAGAGGCTCCAGAGGATTGCCCTTGCCAAGTCGGATAAATCAGAGGAAGAATATACTAGCAACTACTTGAAACAACGATTAAGTGAGGCTGAAGCTGAGAAACAATATCTCTATGAGAAGATCAAACTGCAGGAGAGTTCCCGTGCATCACAGAGCAGTAGTGGCGGTGACCCCTCCCAGATGCTGATGTATTCCAAAATCCATGATCTTCTCTACAGTGTACCTCCCAAGGCAGATAGTCAGCCTAATGAGCGCCACCCTTTCCGAACAAATCCATGA 2232 0.4341 MVTLLRCCPSPPCAFSLMDEWFKTVVISGIELESEIKRNFKFVKLYSFLFQVQTPNFFHSRWPALFFVLFAGLNPSTGQVRTGENPVLGSNLVLPFPLRSCSKLQSLSSTWVFRGFLCXKIERMFELYYMVTGDEFCGPASALYLAKTDDSILTDKVKLLMGASSGSNINQQLSSKMLPPRQQSRVGGLQTSLSLVSSDPRLSPEEPRSTSDNIRESPTESASSRETWPTADAIAAKKMENGKAENDCPEQSVIRRVSSADKITLQDVARERVDIISEKMHHLPEDFLEELKNTLRVILEGGNGSQHRDEFFILQKLVQSRTDLTAKTLIRAHRVQLEILVAINTGIQGFLHPNISLSQTSLIEIFVYKRCRNIACQNQLPADDCTCEICTNRNGFCNLCMCVVCNKFDFEVNTCRWIGCDLCSHWTHTDCAIRDQLICMGPSAKSGSGPSEMVFRCHACKRTSELFGWVKDVFQHCAPSWDGEALMRELDFVSRIFQSSKDPRGRKLLWKCDDLKDKMRGGTLEPNAACRAILMFFQELEVDSPKSLENGESGRLIAPQEACNRIAEVVQEAIRKMEMVADEKMRMFKKAGLALEACERELADKAREAAELKMDRQKKKLQIEELDRIVRLKTAEADMFQSKANEAKREAERLQRIALAKSDKSEEEYTSNYLKQRLSEAEAEKQYLYEKIKLQESSRASQSSSGGDPSQMLMYSKIHDLLYSVPPKADSQPNERHPFRTNP 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2731 743 Coils Coil 595 629 - -
Bisa09g2731 743 MobiDBLite consensus disorder prediction 214 228 - -
Bisa09g2731 743 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 624 644 IPR004082 -
Bisa09g2731 743 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 336 351 IPR004082 -
Bisa09g2731 743 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 408 428 IPR004082 -
Bisa09g2731 743 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 481 500 IPR004082 -
Bisa09g2731 743 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 362 383 IPR004082 -
Bisa09g2731 743 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 663 685 IPR004082 -
Bisa09g2731 743 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 279 301 IPR004082 -
Bisa09g2731 743 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 321 336 IPR004082 -
Bisa09g2731 743 MobiDBLite consensus disorder prediction 170 199 - -
Bisa09g2731 743 Pfam Coiled-coil region of Oberon 589 722 IPR032535 -
Bisa09g2731 743 Pfam PHD - plant homeodomain finger protein 371 494 IPR032881 -
Bisa09g2731 743 SMART PHD_3 401 461 IPR001965 -
Bisa09g2731 743 Coils Coil 637 664 - -
Bisa09g2731 743 CDD PHD_OBE1_like 401 460 IPR047578 -
Bisa09g2731 743 MobiDBLite consensus disorder prediction 695 743 - -
Bisa09g2731 743 MobiDBLite consensus disorder prediction 695 711 - -
Bisa09g2731 743 MobiDBLite consensus disorder prediction 170 245 - -
Bisa09g2731 743 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 184 724 IPR004082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2731 Bisa-ChrBisa09 59124946 59130993 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2731 371 473 PHD Gene Family AT5G57380 29.808 4.43e-08 54.7