Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2727 ATGCCTGTGAATCGAGATCTCTCGGTGTCAAATGGCAGGATGCCACCGAATTCGGAGTCAGGGACGTTATATGAGGCTTTGCATGAGTCTAATTCTTCTCTTAGAAGCTGCAAGAGAAAAAAGCTCTTCTTGTTATGGATTTTTCTCGGTGTTCTTGCGGTGGGCAGTGTGTGGTTTTTCATAGGTTTTCAGAGTGAATCGTTGACGATGATGAGGAAGCAGAAAAGGTGGAGTCATTGTGAGGAGAGAGCTCGAATCTTGCTACAACGTTACAATGTCAGCAAGAAGCAGCTACATGCTTTGGTTTCCTTGTTCTCTGTATCAGATCAGAGCTTATCCAAATGTATTGATGAAAGAGGAGCACAAAAGCTGTTAAGCAGTGGCATCACCAGTACGTCACAGTTGATTTGCCCAGAGAATCAGGTGTTCCAAACGGAGCATATGTGTGTCACAGACAAAGTAGAACTTATAGACCAATGCCCAATTCTCAATGATTATGTCCAGAGAAACCTGGAATCAACAGTGTTAGTGGAAAACACTGTATCGTTGGTCTCACACCCTGCCTTTTTGTCCAACTCGGTTAATCATTTGCTCCACGGAAAGAAAATTGTACAGACCTGGGTATTGGAGTTATGTGCAATTCTGGGTTGTCTGAGTTTGTCTATTTTGGTTAAAGGATGCTGGTGGATTCTTGTTGGAATTACAATATGCTGCAAATTGTTTGGCTTCTTTTTACTTTGGAGCAGTCAGAATCAAAAGCTGGTTGCTCAGCAAAAGCAACCACAATATTCTGCCAGGAGAAATCCAAATGGTACTGGCAGGTGGAGAAAAAAGCTTTTAGTTACATTTGTGTTGCTTGGAATGGTTGGGTCAATTTGGTTATTCTGGCGCTTGAATAAAGATATTATGCTGAGAAGAGAAGAAATGCTTACCAGTATGTGTGATGAGCGTGCCCGCATGCTACAGGATCAGTTTAATGTGAGCATGAGCCATGTCCATGCTCTGGCTACTCTCGTCTCCACTTTTCACCATAGTAAACATCCTTCTGCAATTGACCAGAAAACTTTTGGAGAATACACAGAGAGAACAGCATTTGAGAGACCACTTACTAGTGGTGTAGCTTATGCTCTGAAAGTTCTCCACTTTGATAGGGAGCATTTTGAAAAGCAGCACGGATGGACAATTAAGAAAATGGAAACTGAGAATGAGACACTGGTCCAAGATTGTATTCCGGAAAATCTGGATCCTGCACCCATTCAGGATGAATATGCACCAGTTATATTTGCCCAAGAAACTGTTTCTCATATTGTATCTATTGACATGATGTCAGGGAAGGAAGACCGTGGAAATATCTTGCGAGCGAGGGCAACTGGAAAGGGAGTGCTAACATCTCCTTTTAAACTGCTGAAGTCCAATCACCTGGGTGTTGTACTTACATTCGCTGTTTATAATACTAATTTTCCTCCAGATGCTACACCACAGCAGCGCATTGAAGCTACTGTTGGGTATTTGGGTGCATCCTACGATGTTCCATCACTGGTGGACAAACTCCTGCACCAACTTGCCAGCAAGCAAACCATTGTTGTAAATGTTTATGATACAACTAATGCATCTGCTCCCATCACCATGTATGGTACTGATGTTGTTGATACTGGCCTACTACATATAAGCAACCTAGATTTTGGGGATCCTCTTCGAAAACATGAGATGCATTGCAGATTTAAACATAGGCCTCCATTACCTTGGACAGCAATTAATGCATCAGTTGGAGTACTTGTTATTACTTTGCTTCTTGGTCATATTTTTTATGCAGCGATTAATCGAATAGCAAAAGTGGAGGATGACTATCGTAAAATGAGGGAGCTCAAGACTCGTGCTGAAGCAGCGGATGTGGCAAAATCTCAGTTTCTTGCAACAGTTTCACATGAGATTAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGACACTGAACTAGATGAAAGCCAGATGGACTATGCTAAGACTGCTCACAGAAGTGGTAAAGATCTTATATCAGTGATAAATGAGGTTCTTGATCAGGCTAAGATCGAGGCAGGAAAACTTGAACTTGAAGCTGTAGAGTTTGATCCTCGCTCTATTCTAGATGAAGTCCGATCACTTTTCTCTGGCAAATCCAATGAAAAAGGAATAGAGCTGGCTGTTTATGTATCCAATCAAGTGCCAGAATTTGTCATTGGTGATCCAAATCGATTCCGGCAAATAATTACTAATATTGTTGGAAATTCACTCAAGTTCACTCATGATAAAGGACACGTATTTGTATCGGTTCATCTGACAAATGAAGTAAAGAGCCCACTTCATATTATGGATGCAGTGCTACAAGGCTTCCAGGAGGGGTCAGACAGAACTTACAATACATTGAGTGGGTATCCTGTTGTCAATAGATGGAAAAGCTGGGCAAATTTCAAAAATTTAAGCAGTTTGAATCTGATGGATGAGTCTGAAATGATTCAGTTACTTATAACAGTTGAGGATACAGGCATAGGAATTCCTTTGGATGCACAAAGCCGCATATTCACACCTTTCATGCAAGCCGATAGTTCTACCTCACGAACATATGGTGGAACTGGAATAGGACTGAGTATTAGTAAATGTTTAGTTGACCTCATGGGAGGAGAAATTGGGTTTGTTAGCGAACCTGGAATTGGCAGTACTTTTTCTTTTAGTGGAACTTTCAGGAGAAAAAAACCAACATCTCTTGATGCAAAGTGGAAACAGTGCAATCCTTTTGTTTCAGAGTTTCAAGGTTTGAGAGCTTTAGTAGTAGATAGAAGAAAAATCCGTGCTGAAGTTACAAGATACTATCTGCAGAGGTTGGGGATGTCTGTGGATGTGGCTTTTAAGCTGAACTTGGCATACTCTTCTCTATCTAGTTCTCGCAACATGGGTATTTCTAGACAGTTTGCAATGATTCTGATAGACAAGGATGTTTTGGATATAGAAAGTAGTATATTTAATGCCATCAAGAAAGAGAGACAGAATTATTCCAAAGGGGATTCAAAAGAACTTCCAAAGATTTTTCTCTTGGCGAACCACCTAAACCCTGAAGAATGTGATGCACTCAAATCCGTTGGTGTCATAGATGTTATACCAATGAAACCTCTTTGGCTTAGTGCTTTGGTTCACCGCTACAGAGAGGCTCTTGGAAGTCAAAAGAAACGAGTACCTAGAAAGAAAGAATCAAATCTTGGGAACTTGCTAAGACAGAAACAAATATTGGTGGTTGATGATAATGCTGTAAACAGAAAAGTAGCAGAAGGTGTTCTGCAAAGATATGGGGCAAAAGTTACCTGCGTGGAGGGTGGCAAGGCTGCTTTAAAGATGCTTAAGCCACCACATAGTTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGATGGTTTCGAAGTGACCAGGCAAATTCGCTGTCTGGAGAAAGAGGTAAATGAGAAAATTGCATGTGGTGAAGCATTGGCAGAGATGTTTGGTAATTTGACTCATTGGCGCACACCAATATTAGCTATGACAGCCGATGTAACTCAGGCTTCAAATGAAGAGTGCAGTAGGTGTGGGATGGATGGCTATGTGTCAAAGCCGTTTGAAGAGGAGCAGCTCTATATGGCAGTGGCACGATGCTTTGGGGCCAGTTTGTAG 3693 0.414 MPVNRDLSVSNGRMPPNSESGTLYEALHESNSSLRSCKRKKLFLLWIFLGVLAVGSVWFFIGFQSESLTMMRKQKRWSHCEERARILLQRYNVSKKQLHALVSLFSVSDQSLSKCIDERGAQKLLSSGITSTSQLICPENQVFQTEHMCVTDKVELIDQCPILNDYVQRNLESTVLVENTVSLVSHPAFLSNSVNHLLHGKKIVQTWVLELCAILGCLSLSILVKGCWWILVGITICCKLFGFFLLWSSQNQKLVAQQKQPQYSARRNPNGTGRWRKKLLVTFVLLGMVGSIWLFWRLNKDIMLRREEMLTSMCDERARMLQDQFNVSMSHVHALATLVSTFHHSKHPSAIDQKTFGEYTERTAFERPLTSGVAYALKVLHFDREHFEKQHGWTIKKMETENETLVQDCIPENLDPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRGNILRARATGKGVLTSPFKLLKSNHLGVVLTFAVYNTNFPPDATPQQRIEATVGYLGASYDVPSLVDKLLHQLASKQTIVVNVYDTTNASAPITMYGTDVVDTGLLHISNLDFGDPLRKHEMHCRFKHRPPLPWTAINASVGVLVITLLLGHIFYAAINRIAKVEDDYRKMRELKTRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTELDESQMDYAKTAHRSGKDLISVINEVLDQAKIEAGKLELEAVEFDPRSILDEVRSLFSGKSNEKGIELAVYVSNQVPEFVIGDPNRFRQIITNIVGNSLKFTHDKGHVFVSVHLTNEVKSPLHIMDAVLQGFQEGSDRTYNTLSGYPVVNRWKSWANFKNLSSLNLMDESEMIQLLITVEDTGIGIPLDAQSRIFTPFMQADSSTSRTYGGTGIGLSISKCLVDLMGGEIGFVSEPGIGSTFSFSGTFRRKKPTSLDAKWKQCNPFVSEFQGLRALVVDRRKIRAEVTRYYLQRLGMSVDVAFKLNLAYSSLSSSRNMGISRQFAMILIDKDVLDIESSIFNAIKKERQNYSKGDSKELPKIFLLANHLNPEECDALKSVGVIDVIPMKPLWLSALVHRYREALGSQKKRVPRKKESNLGNLLRQKQILVVDDNAVNRKVAEGVLQRYGAKVTCVEGGKAALKMLKPPHSFDACFMDLQMPEMDGFEVTRQIRCLEKEVNEKIACGEALAEMFGNLTHWRTPILAMTADVTQASNEECSRCGMDGYVSKPFEEEQLYMAVARCFGASL 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2727 1230 FunFam Histidine kinase 4 604 695 - -
Bisa09g2727 1230 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 744 906 IPR003594 -
Bisa09g2727 1230 ProSiteProfiles Response regulatory domain profile. 1089 1226 IPR001789 GO:0000160
Bisa09g2727 1230 Pfam Response regulator receiver domain 1090 1222 IPR001789 GO:0000160
Bisa09g2727 1230 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 686 906 IPR036890 -
Bisa09g2727 1230 SMART CHASE_2 347 546 IPR006189 -
Bisa09g2727 1230 Coils Coil 609 629 - -
Bisa09g2727 1230 Gene3D - 1083 1228 - -
Bisa09g2727 1230 Gene3D - 928 1072 - -
Bisa09g2727 1230 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 618 698 IPR036097 GO:0000155|GO:0007165
Bisa09g2727 1230 Pfam CHASE domain 350 544 IPR006189 -
Bisa09g2727 1230 PANTHER TWO-COMPONENT HISTIDINE KINASE 271 1219 - -
Bisa09g2727 1230 SMART REC_2 1088 1222 IPR001789 GO:0000160
Bisa09g2727 1230 PRINTS Bacterial sensor protein C-terminal signature 872 890 IPR004358 GO:0016310|GO:0016772
Bisa09g2727 1230 PRINTS Bacterial sensor protein C-terminal signature 855 865 IPR004358 GO:0016310|GO:0016772
Bisa09g2727 1230 PRINTS Bacterial sensor protein C-terminal signature 837 851 IPR004358 GO:0016310|GO:0016772
Bisa09g2727 1230 PRINTS Bacterial sensor protein C-terminal signature 896 909 IPR004358 GO:0016310|GO:0016772
Bisa09g2727 1230 ProSiteProfiles Histidine kinase domain profile. 639 912 IPR005467 -
Bisa09g2727 1230 ProSiteProfiles CHASE domain profile. 347 571 IPR006189 -
Bisa09g2727 1230 SMART HKATPase_4 744 912 IPR003594 -
Bisa09g2727 1230 Gene3D - 298 350 - -
Bisa09g2727 1230 Gene3D - 66 110 - -
Bisa09g2727 1230 Gene3D - 696 913 IPR036890 -
Bisa09g2727 1230 SUPERFAMILY CheY-like 931 1067 IPR011006 -
Bisa09g2727 1230 Pfam His Kinase A (phospho-acceptor) domain 632 697 IPR003661 GO:0000155|GO:0007165
Bisa09g2727 1230 CDD HATPase_EvgS-ArcB-TorS-like 749 906 - -
Bisa09g2727 1230 FunFam Histidine kinase 4 351 578 - -
Bisa09g2727 1230 Gene3D CHASE domain 351 578 IPR042240 -
Bisa09g2727 1230 CDD REC_hyHK_CKI1_RcsC-like 1090 1222 - -
Bisa09g2727 1230 CDD HisKA 632 693 IPR003661 GO:0000155|GO:0007165
Bisa09g2727 1230 Gene3D - 603 695 - -
Bisa09g2727 1230 ProSiteProfiles Response regulatory domain profile. 936 1066 IPR001789 GO:0000160
Bisa09g2727 1230 SMART HisKA_10 632 697 IPR003661 GO:0000155|GO:0007165
Bisa09g2727 1230 SUPERFAMILY CheY-like 1086 1226 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2727 Bisa-ChrBisa09 59011620 59021433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2727 39 198 Miscellaneous Gene Families AT5G35750 28.235 4.58e-09 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa09g2727 CHASE 1.2e-33 CL0165