Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2726 ATGGTTTCTTCAGACAAAACTGCTGATCACAAAGTTTCTTCTGACAAATTGCTTCAGAGGCCGAGTTCTCATAGCGATATCACAGTTTCACAAGAGACTTGTGATAATGAAATTGATTCATCCAAACCAGATGGAGCAAGAAGCATTCCTTCTGATGTAGCAAAAAAAGAAGTGCCGGATTCTGATGCTACTGCCAGTGCCCCGCCATTAGATCAAGAAAGAAGTGCATGCACTTCGCCACCTCAGAAACCTTCGCAGAGCCCTAATACTGTTCAGCATGCATTACAATCTGGTCAGGAAAGGTCCTCTATAATATGTGAAAAGGGTTCAAAGGATATTGTAGCTGAAAAAGAAGTGCTGGATTCTGATGCTACCGCCTATGCAGTAAAATTGGATCAACAAGGAAGTACATTCTCTTCATCACATGAGAAATCTCCGCAGAATCCCAATACTGCTCCACATTCAGTACAAGCTGGTCAGGGCAGTCCCTTTACAATAAGTGGAAAGGTCTCAAAGGGTGGGTTTAATTGGCGAAAATATGGCCAGAAACATGTTAAGGGTAATGAATTTATAAGGAGCTATTACAAATGTACACATCCCAACTGCCAGGCAAAGAAACAATTGGAACAGTCAAATGATGGGCAGATTACAGATACCATTTTCATTGGTCAGCATAATCATCCTCAAGTGAACACCCCGGTACCAGTTGATGGTGTTGTGACTGTTGTTGAACAAAGACCAGATGTGCCCTCTTTAGTCAATGTGGAAGACAAAGCATCCATTGAGCATGGATATGTGCCTCAACACATCAAGCCTCTAGAAGCTCTTCCAATATCAACATTGTCTGCAAGTAATGAGTCGAAAGCTGTACATTTACAATCAACTCGAATGAGGAATGCAGTTCCTGCAAATGAGGATCCTGAGTCAAAACGCCTGAAGAAGGATAATAGTAATGCTGATGTCACTGGAGTCGAGAGGTCAATTGGTGAATCTCGTGTTGTTGTTCATAGTTCAAGTGAGGTTGATTTTATTAATGATGGGTACCGCTGGCGCAAGTATGGGCAGAAACTGGTCAAAGGAAATCCAAATCCAAGAAGTTATTATCGCTGCTCGAATTCTGGATGCCCTGTCAAAAAGCACGTGGAAAGGGCTTCTCATGATCCAAAAATTGTAATAACTACCTATGAGGGACATCATGATCATGATAGCCCCTTTGGAAGGACTGTTAATCATAACGGAGGAGCAATGACTCCTGCAACAAACGTCAATGGCGATTCAGGAACCAAATCTCAGGGAAACTCTGTTTGTGTAAATACAACAGAACCCACTTGCTTGGACTCTGAATGCAGATTAAATGAGCAACCAAACGGTGAGAAAATTGCTAAACCAAACTCTGGCGATATGGTTGAATCTCAAGCGATCACCCTTCCTAGTCAGGTTCTTGGAAATACATCAAGCGAGAAAGAAAAAAATGGCAACTCGGGAACCCAAAAAGACTCTGTTAGCGTTGACCTCATAAGCTCTACAGATTCTGAGCATCCATGTAGATTAAATGAACAGCAGAAAGATGAGGTAAGAACCATATCAGAAGAAAGTAAGAATGAAAGTAAATTGAATAAGCGACTTGAGCCTGATGCAGATAGAACCTGTCCAAAGCTAAATTTGCAGTGCTCTTCAAAGTTAAGCTAG 1689 0.4174 MVSSDKTADHKVSSDKLLQRPSSHSDITVSQETCDNEIDSSKPDGARSIPSDVAKKEVPDSDATASAPPLDQERSACTSPPQKPSQSPNTVQHALQSGQERSSIICEKGSKDIVAEKEVLDSDATAYAVKLDQQGSTFSSSHEKSPQNPNTAPHSVQAGQGSPFTISGKVSKGGFNWRKYGQKHVKGNEFIRSYYKCTHPNCQAKKQLEQSNDGQITDTIFIGQHNHPQVNTPVPVDGVVTVVEQRPDVPSLVNVEDKASIEHGYVPQHIKPLEALPISTLSASNESKAVHLQSTRMRNAVPANEDPESKRLKKDNSNADVTGVERSIGESRVVVHSSSEVDFINDGYRWRKYGQKLVKGNPNPRSYYRCSNSGCPVKKHVERASHDPKIVITTYEGHHDHDSPFGRTVNHNGGAMTPATNVNGDSGTKSQGNSVCVNTTEPTCLDSECRLNEQPNGEKIAKPNSGDMVESQAITLPSQVLGNTSSEKEKNGNSGTQKDSVSVDLISSTDSEHPCRLNEQQKDEVRTISEESKNESKLNKRLEPDADRTCPKLNLQCSSKLS 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2726 562 FunFam WRKY transcription factor 162 231 - -
Bisa09g2726 562 ProSiteProfiles WRKY domain profile. 166 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g2726 562 SUPERFAMILY WRKY DNA-binding domain 337 404 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa09g2726 562 MobiDBLite consensus disorder prediction 515 548 - -
Bisa09g2726 562 MobiDBLite consensus disorder prediction 1 17 - -
Bisa09g2726 562 MobiDBLite consensus disorder prediction 134 165 - -
Bisa09g2726 562 Gene3D WRKY domain 331 397 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa09g2726 562 MobiDBLite consensus disorder prediction 287 324 - -
Bisa09g2726 562 FunFam WRKY transcription factor 57 330 404 - -
Bisa09g2726 562 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 123 421 IPR044810 GO:0003700
Bisa09g2726 562 MobiDBLite consensus disorder prediction 18 36 - -
Bisa09g2726 562 ProSiteProfiles WRKY domain profile. 339 404 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g2726 562 MobiDBLite consensus disorder prediction 479 514 - -
Bisa09g2726 562 Pfam WRKY DNA -binding domain 174 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g2726 562 Pfam WRKY DNA -binding domain 345 401 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g2726 562 SUPERFAMILY WRKY DNA-binding domain 170 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa09g2726 562 Gene3D WRKY domain 164 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa09g2726 562 MobiDBLite consensus disorder prediction 303 320 - -
Bisa09g2726 562 SMART WRKY_cls 344 403 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g2726 562 SMART WRKY_cls 171 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g2726 562 MobiDBLite consensus disorder prediction 71 104 - -
Bisa09g2726 562 MobiDBLite consensus disorder prediction 479 553 - -
Bisa09g2726 562 MobiDBLite consensus disorder prediction 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2726 Bisa-ChrBisa09 58972613 58976461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2726 143 435 WRKY Transcription Factor Family AT2G04880 46.885 3.18e-82 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa09g2726 WRKY 5.9e-26 CL0274