Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2637 ATGGAAAACGCTGATTCCGATGAACCCGTAAAGAAGAGGCCACATTTGAGTTCAGTATCCTCCCCCATGGCACGGAATTCGACCAACCCATCAACCAATAACAAATGCGCTGATATGGGAGTCTTGCAGTTCCAGAATCAGCAGCTTGTTCAACAGATAGACCATCAGAAAAAGGCATTGCATGATCTTGAAGTAAAAGTTAGAGACTTAAAAGACAGGAAAAATTCTTATGATGACATGATAATTGCAGTGAACCAACTCTGGAGTCAGTTGGTTGATGATCTGGTTCTTCTTGGCATACGAGCTGGGAGAGGCCAAAATGCATTACAAAATTTGGATTGCCCTGGTAATTCTCAATGTTCACTTCCTTTGTGTCCTGTGGAGGATATCTTCCTTTGTAGACTAATGCAGAAAGATTCTATTGAAGCCAGCCAAAATGATCAGATTGTTGACTATGTTGAGGAAGCTCTTGCTTTGCGTCAGTCATCTACAAGGGAATTGTTGAAACTTATTGAAGATACCATACATGCTCAGAGGGAACGAACTTACTCTATTGCCCAGGATTTGCATGGAAAAGCAACTTCTGAAGATGTTGTCATTCAAATGTCTAGGATTGATGATATGATGAAAGAGGAGGCAAATAATTTACATGAAGTAATTGATGCTCTCCATGTCAAGCATCAAGAGTATACTGTTGCTATTCAGAATTATATTAGCAGCCACTTACAGGATCAATCTGAGATTACACGCTTAGCAGGTGAACTTGATGAGAGCATGGGTGAACTTGACGAGAGTAGAAGAAAATTAGTGAATCTGAAAATGCAAAAGGATGCAGCAATAGGGATGTATTCTCCCATTGCAGATGCAGTGAATGGAAACTTGTCTCCTGAAAAGCCTGCAGACAGGATCATGGGATTGCGTGAGTTGAAGGATTCAATTGAGGAAGCAAAGATGGTTGTCGCTGACCGTCTTTCAGAGCTTCAAGAAGCATTGGAAGACAATCTGACCTTGACAAGGCAATTGCAAGATCTTCAGAATGAATTGACTGATGACAAGTATGTACGCTCAACTCGAATCTATTCTTTGGTAAATGATCAACTTCAACATTGGAATGCTGAATTGGAGCGATATAAAGCATTGATAGAATCACTGCAGGCTGAAAGGGTTCATGTTATGAAATGGGAGAAGGAACTGAACTCAAAATTGGAGTCTGCAGATACTGCAAGACATGCAGTTGACAATTCTGACTGCAGGACTGAAGAGCTGGAGCTTCAGTTGCAGAAGTGTACTATTGAAAAGAATGATCTTGAAATAAAGATGGAAGAAGCTGTACAGGATACTGGGAGAAAAGATATTAAGTCTGAGTTCCATGTCATGGCTTCAGCATTATCTAAAGAAATGGGAATGATGGAAGCTCAATTGAAACGATGGAAGGATGCAGCTCATGAGGCAGTTTCCTTGCGTGAGAAAGCACATTCACTAAGATCTTTGTTAAGTGGGAAGACGAGCGAAATAAAGAGCTTAGCAAACAAATGTGCTGAACAAGTTGTAGAGATAAAGTCTTTAAAATCATTGATTGAAAAATTGCAGAAGGAAAAACTGGAATTACAACACTTTCTGGATTTGCAAGGACAGGAGAATTATGATAAAAGAGGTTTAATAGAAATCAGAGAATCAGAAAGTAAAGCTCTCTGTCAAGCTGAAGTACTGAAAAATGCTTTAGATGAGCATAGTTTAGAGTTGAGAGTAAAAGCTGCTAATGAAGCTGAAGCTGCTTATGAACAAAGGCTTTCTGCTGCTGAAGCTGAAATAGAGGATCTAAGGGCCAAGCTGGATACTTCTGAGAGAGATATTTTGGAGCTGACTGAGGCTATTAAAGTTAAAGATGCTGAGTCAGAGGCATATATATCTGAAATTGAGACTATTGGACAAGCTTATGAAGATATGCAGACGCAGAACCAACATCTGTTGCAGCAGGTGACTGAAAGGGATGACTATAATATTAAGCTTGTATCAGAGAGCGTGAAGACAAAACAGGCACATAGCACTTTACTGTCTGAAAAACAGGCTTTGGCGAAGCAACTGCAGCAAATTAATGCTTCAATAGAAACTTTAAAGATGAGGATTACACATAGTGAAGAACAGATGAAAGCCCTTTTATCGGAAGCCATAAAATCTACACAAGATGAAAAACACCTTGCAGTCACCCTTGAATCTGCGAAGTGGGAGTTAGCTGATGCTGAAAAGGAGTTGAAGTGGCTGAAATCTGCCGTTTCTTCTTCTGAGAAAGAATATGATCAAATTCAGGAAGACATGGAAGCTATACAAAATGAGTTGGATAGTGAAAGGAGTTCAAGAAAGAAGCTTGAGGAAGAACTCAAGGAATTGAATAGCAAAATTGCTGAGCTGAGTTCCGAAACTGGAGAGACAGCAATACAAAAACTCCAAGATGAAATTAGGATTTGCAAGAGCATGATCAAGTGCACAGTCTGTTCTGATCGTCCTAAGGAGGTTGTGATTGTCAAGTGCTATCATCTGTTCTGCAATCCATGCATCCAAAGAAACTTAGAACTCCGTCATCGCAAGTGTCCCGCCTGCGGAACTGCATTCGGTCAGAGCGATGTTCGGTTTGTAAAAATATGA 2643 0.4014 MENADSDEPVKKRPHLSSVSSPMARNSTNPSTNNKCADMGVLQFQNQQLVQQIDHQKKALHDLEVKVRDLKDRKNSYDDMIIAVNQLWSQLVDDLVLLGIRAGRGQNALQNLDCPGNSQCSLPLCPVEDIFLCRLMQKDSIEASQNDQIVDYVEEALALRQSSTRELLKLIEDTIHAQRERTYSIAQDLHGKATSEDVVIQMSRIDDMMKEEANNLHEVIDALHVKHQEYTVAIQNYISSHLQDQSEITRLAGELDESMGELDESRRKLVNLKMQKDAAIGMYSPIADAVNGNLSPEKPADRIMGLRELKDSIEEAKMVVADRLSELQEALEDNLTLTRQLQDLQNELTDDKYVRSTRIYSLVNDQLQHWNAELERYKALIESLQAERVHVMKWEKELNSKLESADTARHAVDNSDCRTEELELQLQKCTIEKNDLEIKMEEAVQDTGRKDIKSEFHVMASALSKEMGMMEAQLKRWKDAAHEAVSLREKAHSLRSLLSGKTSEIKSLANKCAEQVVEIKSLKSLIEKLQKEKLELQHFLDLQGQENYDKRGLIEIRESESKALCQAEVLKNALDEHSLELRVKAANEAEAAYEQRLSAAEAEIEDLRAKLDTSERDILELTEAIKVKDAESEAYISEIETIGQAYEDMQTQNQHLLQQVTERDDYNIKLVSESVKTKQAHSTLLSEKQALAKQLQQINASIETLKMRITHSEEQMKALLSEAIKSTQDEKHLAVTLESAKWELADAEKELKWLKSAVSSSEKEYDQIQEDMEAIQNELDSERSSRKKLEEELKELNSKIAELSSETGETAIQKLQDEIRICKSMIKCTVCSDRPKEVVIVKCYHLFCNPCIQRNLELRHRKCPACGTAFGQSDVRFVKI 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2637 880 PANTHER RING FINGER PROTEIN-RELATED 8 880 IPR013956 GO:0004842|GO:0010390
Bisa09g2637 880 Coils Coil 367 387 - -
Bisa09g2637 880 Coils Coil 737 806 - -
Bisa09g2637 880 Gene3D - 667 830 - -
Bisa09g2637 880 Coils Coil 255 275 - -
Bisa09g2637 880 Coils Coil 688 722 - -
Bisa09g2637 880 Coils Coil 583 624 - -
Bisa09g2637 880 MobiDBLite consensus disorder prediction 19 36 - -
Bisa09g2637 880 Coils Coil 327 347 - -
Bisa09g2637 880 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 831 877 IPR013083 -
Bisa09g2637 880 Pfam Zinc finger, C3HC4 type (RING finger) 827 869 - -
Bisa09g2637 880 MobiDBLite consensus disorder prediction 1 36 - -
Bisa09g2637 880 Coils Coil 46 80 - -
Bisa09g2637 880 Coils Coil 512 539 - -
Bisa09g2637 880 CDD RING-HC_Bre1-like 820 876 - -
Bisa09g2637 880 ProSitePatterns Zinc finger RING-type signature. 843 852 IPR017907 -
Bisa09g2637 880 Coils Coil 419 446 - -
Bisa09g2637 880 SMART ring_2 828 866 IPR001841 -
Bisa09g2637 880 ProSiteProfiles Zinc finger RING-type profile. 828 866 IPR001841 -
Bisa09g2637 880 SUPERFAMILY RING/U-box 827 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2637 Bisa-ChrBisa09 55679336 55742475 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2637 801 875 RAD5 or RAD16-like Gene Family AT5G05130 27.381 1.14e-07 53.9