Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2635 ATGCGACGATCCAGAGCCGCAGATCCAACGGCAGCCCCAACCGCTAAAGCAATCGGTCAAGAATCTAAGAAGGAAGTCAGATTCAGAGGTGTCAGGAAGCGGCCATGGGGTCGATTCGCCGCCGAGATCAGAGATCCGTGGAAGAAGGCGCGTGTGTGGCTCGGAACCTTTGATTCCGCCGAGGACGCCGCGCGTGCGTACGACGCTGCGGCTCTGTCATTTCGTGGACCGAAGGCCAAGACCAATTTCCCCTTGACGAACCCTGAATCGGGTTTGTCTCAGATTCCTTTGTACCATCGCCGAGATTTTGAAGATCACCATCATCATCACCATGGGTTTTCGAAGTTCGATCATGGGGTTCAGGTGAATCGGCCTACCACGAGCAGTATGAGTAGCACCGTTGAATCATTTAGCGGACCCAGGGTGTCCAATCCTGTGCCGTCGATCCCGAGGGTGCAGCGTAGACCCGTGAACCCGGTTCCACCGGATGATTGCCACAGCGATTGCGATTCTTCGTCCTCGGTGATTGACGATGAGGATTGCGTTCTCACCTCTTCGTTCCGCAAAATCTTGCCGTTCGATCTGAACTGCCCGCCGCCGATGGATGACGACGATTTCACCGCCGATGACCTTCAAGCCACTACCTTGTGCCTCTGA 657 0.5556 MRRSRAADPTAAPTAKAIGQESKKEVRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEDAARAYDAAALSFRGPKAKTNFPLTNPESGLSQIPLYHRRDFEDHHHHHHGFSKFDHGVQVNRPTTSSMSSTVESFSGPRVSNPVPSIPRVQRRPVNPVPPDDCHSDCDSSSSVIDDEDCVLTSSFRKILPFDLNCPPPMDDDDFTADDLQATTLCL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2635 218 MobiDBLite consensus disorder prediction 1 26 - -
Bisa09g2635 218 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 20 181 - -
Bisa09g2635 218 ProSiteProfiles AP2/ERF domain profile. 27 84 IPR001471 GO:0003700|GO:0006355
Bisa09g2635 218 CDD AP2 27 84 IPR001471 GO:0003700|GO:0006355
Bisa09g2635 218 FunFam Ethylene-responsive transcription factor 2 26 85 - -
Bisa09g2635 218 SUPERFAMILY DNA-binding domain 28 85 IPR016177 GO:0003677
Bisa09g2635 218 Pfam AP2 domain 27 76 IPR001471 GO:0003700|GO:0006355
Bisa09g2635 218 SMART rav1_2 27 90 IPR001471 GO:0003700|GO:0006355
Bisa09g2635 218 Gene3D AP2/ERF domain 26 86 IPR036955 GO:0003700|GO:0006355
Bisa09g2635 218 MobiDBLite consensus disorder prediction 120 143 - -
Bisa09g2635 218 MobiDBLite consensus disorder prediction 109 174 - -
Bisa09g2635 218 PRINTS Ethylene responsive element binding protein signature 50 66 IPR001471 GO:0003700|GO:0006355
Bisa09g2635 218 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2635 Bisa-ChrBisa09 55670978 55671634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2635 1 218 AP2-EREBP Transcription Factor Family AT1G50640 55.085 1.07e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa09g2635 AP2 9.1e-14 CL0081