Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2594 ATGAACAATAATCTGGCATTTCTTGCTAGAACTGTTGCAACAAAATTCCACTGCCCATCTTCTCCATTGCGATTCTATTGTTCGTCCTCGGTGTCTGTGCCTTCTTCCAGCAATAAGCTCTTTGTTGGAGGGTTGTCATGGTCAGTGGATGAGAAGTCCCTGAAAGACGCTTTCTCTTCATTTGGTGAAGTCACTGAAGTGAGGATTGTATATGACAAAGACAGCGGTAGGTCTAGAGGGTTTGGATTTGTCATATTTTCAAACGAAGATAATGCCAAATGTGCAAAAGAAGCAATGGATGGAAAGGCACTACTAGGTAGACCATTGAGGATAAATTTTGCCCTTGAGAAGGTCCGTGGTGGACCTGTTGTAGTTCCTCGGATTTCAGATATTGGACATATAAACAGGCGTGGCACTTAA 420 0.4286 MNNNLAFLARTVATKFHCPSSPLRFYCSSSVSVPSSSNKLFVGGLSWSVDEKSLKDAFSSFGEVTEVRIVYDKDSGRSRGFGFVIFSNEDNAKCAKEAMDGKALLGRPLRINFALEKVRGGPVVVPRISDIGHINRRGT 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2594 139 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 40 110 IPR000504 GO:0003723
Bisa09g2594 139 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 38 116 IPR000504 GO:0003723
Bisa09g2594 139 Gene3D - 24 119 IPR012677 -
Bisa09g2594 139 SUPERFAMILY RNA-binding domain, RBD 34 122 IPR035979 GO:0003676
Bisa09g2594 139 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 29 117 - -
Bisa09g2594 139 SMART rrm1_1 39 112 IPR000504 GO:0003723
Bisa09g2594 139 CDD RRM2_NsCP33_like 39 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2594 Bisa-ChrBisa09 53714080 53717698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2594 36 117 C2H2 Transcription Factor Family AT2G19380 39.286 7.38e-14 65.5