Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2582 ATGTCTTCCTCACCATCATCATCATCGCCATCTTCTTCACCTTCATCCCCAGATAATGTTATTCGTGATCCTGGCCCTAGCACCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACCCCCTCATCACCCTGAAGCTGGCCCTTCTTCTTCGTCTGGCTCCCGCCAACGTGCTATGCCTATGAATGAGGTATGGCCTGGGCCTTTTCTCGAAGCTTTAGCATCCCAAGTTGCCTTGGAAGCTTCTCGCTCTCATGGACGCCTCGCTGCAGCTCCTGCCATTGCCAATCTCTTTCAGGTTTGTTCCACATGGCGAGCTATTTCCCGCTCGGAGCTCTTGTGGCAGCGACAAACGCGACGCATTTGGCGTCGCGGCCATAGGCTGCGCGCCACGTGGCACGATGAATTCATCTACTGGCATCGAACGGCCAGGAATTTCGCCACAGGCAGATACGCCTATGCCACCCTACGCTATCACCTATACCCTCCCTCCCTCATCGATCCTCACGCCCAACTCTGCCGCTGCCTCACTCTCTCCGACCACCACCTCGCCTGTGGCTTCGCCGATGGCTCCGTCCGCCTTTTCGACCTCGAATCTCGCGCCCACGTCAGCACCTTCCAGTCCCATCACGATGACATGTTAGGCCCGTTCTCGAGATCTGTGTCCGGCATTGTCATCACAAACTCCACGCTGGCGTTCGCCACTCTGGACGGAAACATCTACGTGGCACTCATCAACGGCCAGCCCGTGGCTCCTGTCGTCCGATCCGGCGACGTTGTCAACGACGGAGTATTGATAGAGTTTGCTGGAGGAGGAGGACGGTGGTGGGTGGGTCTCTTCGCCGGCGCTCGGAACCGGGCATTCCAGGTCTGGGACTCCCACAGCAATGAACAGGTTTACATTGGCGGATCTTTGACCGACCCGGAATCAGTCCAGGGATGGCACATGTTGACGGAGATGACTGAACCGGTGGGTCGCCTCCGCGTCACGACGCGTGAGATGGCCGTGGCGTGCACGCGCTCACGGCTCATAGTGTTCGATCTGAGAAACCCAGGGATTGTATTGCGTGAGCTAGTTTCCAACGTGGGGTTCATAGTGAGCTCGCTGGACGTGAGCCACGATGCGTTCGTTATCGTGGAGAGGAGGGGCCGTGCCAGAGTGCGCCGTGTAAGCACGTTGGAGCCGGTCTGTGAATTTATGGTGACAGGAGTATCACTGAGGGGGTTAATTGGGTGTATGAACACGGGCTACGCGCTAATGTGCGCCGGTGGTTATGTAAGAGTGTGGGACGTAGAACGCCGGGAGGGACATCTACATTTAACTCTTGCAGAAAGATTAGGAATGGGGATGGCCATGGCCGCGAGTGAGAGACACGTGTCGTTATCTTGTAGAGACACGTTGGTACACCTATGGGACTTCGGTGTACAGTAA 1440 0.5611 MSSSPSSSSPSSSPSSPDNVIRDPGPSTRRRRRRRRRRRRRRPPHHPEAGPSSSSGSRQRAMPMNEVWPGPFLEALASQVALEASRSHGRLAAAPAIANLFQVCSTWRAISRSELLWQRQTRRIWRRGHRLRATWHDEFIYWHRTARNFATGRYAYATLRYHLYPPSLIDPHAQLCRCLTLSDHHLACGFADGSVRLFDLESRAHVSTFQSHHDDMLGPFSRSVSGIVITNSTLAFATLDGNIYVALINGQPVAPVVRSGDVVNDGVLIEFAGGGGRWWVGLFAGARNRAFQVWDSHSNEQVYIGGSLTDPESVQGWHMLTEMTEPVGRLRVTTREMAVACTRSRLIVFDLRNPGIVLRELVSNVGFIVSSLDVSHDAFVIVERRGRARVRRVSTLEPVCEFMVTGVSLRGLIGCMNTGYALMCAGGYVRVWDVERREGHLHLTLAERLGMGMAMAASERHVSLSCRDTLVHLWDFGVQ 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2582 479 Gene3D - 123 265 IPR015943 GO:0005515
Bisa09g2582 479 MobiDBLite consensus disorder prediction 1 22 - -
Bisa09g2582 479 SUPERFAMILY F-box domain 97 144 IPR036047 GO:0005515
Bisa09g2582 479 Gene3D - 281 479 IPR015943 GO:0005515
Bisa09g2582 479 MobiDBLite consensus disorder prediction 1 64 - -
Bisa09g2582 479 MobiDBLite consensus disorder prediction 27 45 - -
Bisa09g2582 479 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 160 476 IPR011047 -
Bisa09g2582 479 PANTHER WD40 REPEAT PROTEIN 12, 37 18 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2582 Bisa-ChrBisa09 53213780 53221745 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Bisa09g2582 None None None