Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2554 ATGGGTTATAAATGTGATTTTTGTGGAGACCAAAGGTCCATGGTGTACTGCCGTTCTGATGCTGCATGCTTATGTTTGTCATGTGATCGGAATGTTCATTCAGCTAATTCCCTTTCTAGGCGTCATTCAAGAACCCTATTATGTGAGAGATGCAATTCACAGCCTGCCCTTGTAAGGTGTGCTGAAGAGAGGATATCACTTTGTCAGAACTGTGATTGGTTGGGTCACAGTACTTCTACATCTTCGTTAACTCATAAGAGGCAAACGATCAATTGCTACTCAGGCTGCCCTTCGGCAGCAGAACTTTCTTCAATATGGTCATTTGTCTTAGATATCCCTTCTATTGGGGAATCTTCATGTGAGCAGGAACTAGGTTTGATGAGCATTAATGAGAACAGCAACAAGAGTGCTTTGTTTCCTCCCAAAAGGCAGAATGTATCTGGTTCAGCTCAAATAGCTGATAAACACGGCATAGATAAATCTTCGGTTGGGGAATCTTCAATGCGGCAGTCAAGCTCAGAACCTTGTATTCTAGACCAATCTGCTGGACCTGCCAATGAATGCCTGCCCAAGTTATACTGTCCCAGTGCAAAGGGTCCCAGACTATGCGAAGATGATAACTTGCAAGGTGATTTTGATATGGATGAAGTGGATCTTAATCTTGAAAACTACGAAGAACTTTTTGGCATGGCTCTAAGTCACTCTGAAGAGCTTTTTGAGAATGGCGGGATTGATAGCTTGTTTGGGACAAAGGAAATGTCTGCTGGCGATTCCCATTGTCAGGGTGCTGCTGCTGCTGAGGGGTCATTGGTTGGACTGGTCAATGCAATTCAACCAGTATGCAGCAATGCGGCATCTGCAGATTCCATGTTAAGTACTAAAACCGAACCGATTCTCTCTTTTACTGGAAGGCAAGGACAATCAAACCTTTCATTTTCTGGCGTTACTGGAGAGAGTAGTGGTGCAGATTATCAAGACTGTGGGGCTTCTTCAATGCTTCTCATGGGAGAACCTCCTTGGTGCCTTCCATGCCCTGAGAATTCCCTACAAACTGCTAACCGCAGTAATGCTGTCATGCGTTACAAGGAAAAGAAGAAGACACGCAAGTTTGAAAAAAGAGTGAGGTATGCCTCTCGCAAGGCAAGGGCTGATATTCGGAGGCGCGTGAAGGGCCGGTTTGTTAAGGCAGGTGATGCCTATGATTATGACCCTTTGAGCCAAACCAGAAGCTGCTGA 1236 0.4498 MGYKCDFCGDQRSMVYCRSDAACLCLSCDRNVHSANSLSRRHSRTLLCERCNSQPALVRCAEERISLCQNCDWLGHSTSTSSLTHKRQTINCYSGCPSAAELSSIWSFVLDIPSIGESSCEQELGLMSINENSNKSALFPPKRQNVSGSAQIADKHGIDKSSVGESSMRQSSSEPCILDQSAGPANECLPKLYCPSAKGPRLCEDDNLQGDFDMDEVDLNLENYEELFGMALSHSEELFENGGIDSLFGTKEMSAGDSHCQGAAAAEGSLVGLVNAIQPVCSNAASADSMLSTKTEPILSFTGRQGQSNLSFSGVTGESSGADYQDCGASSMLLMGEPPWCLPCPENSLQTANRSNAVMRYKEKKKTRKFEKRVRYASRKARADIRRRVKGRFVKAGDAYDYDPLSQTRSC 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2554 411 MobiDBLite consensus disorder prediction 153 176 - -
Bisa09g2554 411 CDD Bbox1_BBX-like 47 90 - -
Bisa09g2554 411 Pfam CCT motif 354 396 IPR010402 GO:0005515
Bisa09g2554 411 ProSiteProfiles CCT domain profile. 354 396 IPR010402 GO:0005515
Bisa09g2554 411 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 399 - -
Bisa09g2554 411 CDD Bbox1_BBX-like 4 47 - -
Bisa09g2554 411 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Bisa09g2554 411 SMART bboxneu5 48 90 IPR000315 GO:0008270
Bisa09g2554 411 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bisa09g2554 411 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2554 Bisa-ChrBisa09 51620760 51624446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2554 1 410 C2C2-CO-like Transcription Factor Family AT5G48250 56.325 1.34e-152 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bisa09g2554 CCT 8.2e-16 CL0281