Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2440 ATGCAAAACGTCGCAAAGAACGTCAGCCGTCAGTCACTTCAATCACGGAGAAATCAACGGTCCAGACTATTCACTTCTCGCACTCTCACCGTATCCACTTGGTTCTGTTCTGGGTCTGAGGTTTTAGGGTTTTGTTCTGTTTTTCTCATCCAATTTGTCTGGAAGCTCTTTTGCAAGAAATTTCGCTTTCTGAGTAGTGGGTTGAGTGTTTTTTCCCTTGAGTTTTGGGTCTTTCGTTATCTTGTTTCCTCTGAGTCTTTACTTGATATGGATTTGTTTGAGCCTGATGGAAATGGAAATGAGGAATCTTTGCCACCACCACCTCCACCTCCTGAGGTCCCCCCGAATGTTGTTCCGGTGAAAGCCGACGAAGCAATCCCTCCTGAGCCAATTAAGAAAAAGGCTTCCCGGGTTCCAATAGCCAGACGTGGGCTGGGATCCAAAGGAAGTAAACTACCTCTTCTCACAAATCATTTCAAAGTTAATGTTACTAACAACGAAGACCATTTCTTCCAGTACAGTGTGGCTCTTTATTATGAAGATGGACGCCCCGTAGAAGGTAAGGGTGTAGGAAGAAAAGTAATTGATAGGGTGCAGGAGACTTACGATTCTGAGTTAGCGGGAAAGGACTTTGCTTATGATGGGGAGAAGAGTTTGTTTACTGTCGGACCTCTTCCTCGAAACAAGCTCGAGTTTACCGTTGTCATTGAGGATGTCACATCAAACAGGAATAATGGAAATTGCAGCCCTGATGGTCAGGGGAGTCCAAACGAGAGTGATAGGAAGAGAATGCGGCGCCCATATCGTGCCAAAACATTTAAAGTGGAGATTAGTTTTGCTGCTAAAATCCCAATGTCGGCCATTGCCAGTGCTTTGCGTGGGCATGAGTCTGAGAATTTCCAGGAAGCCATAAGAGTGCTCGATATTATTTTAAGGCAACATGCTGCTAAGAAAGGCTGCCTACTTGTTCGGCAATCATTCTTTCACAATGATCCGATGAATTTTGCTGATGTCGGAGGTGGGGTCCTAGGCTGCAGAGGATTCCATTCAAGTTTTAGGACCACACAGAGTGGCTTGTCCCTTAACATAGATGTTTCCACTACTATGATAATACAACCTGGGCCTGTCGTGGATTTCTTAATTGCCAACCAAAATGTAAGAGATCCTTATTCGCTTGACTGGGCAAAGGCAAAAAGGACTCTGAAGAATTTGAGGATTACGACTAGCCCATCGAATCAGGAGTTCAAGATATCTGGGCTTAGTGAACTCCCATGCAGGCAGCAGACGTTCACCCTGAAAAACAAGGGTGGTGATGATGGCTCGGAGGAAGTAACGGTTTATGATTATTTTGTAAATCATCGAAAGATCGATCTTCGTTATTCTGCTGATCTCCCATGCATTAATGTTGGAAAGCCTAAACGTCCAACTTATTTCCCCATTGAGCTGTGCTCTTTGGTATCATTGCAACGATACACAAAAGCCTTGACTACACTTCAAAGGGCTTCACTGGTGGAGAAGTCGAGGCAGAAGCCACAAGAGAGGATGAAGGTGTTATCTGATGTTCTAAGAACCAGCAAATATGATTCTGAGCCTATGCTTCGTACCTGTGGAATTTCAATCAGTACTGGCTTTACACAAGTGGAGGGTCGTGTTTTGCCTGCTCCAAGGTTGAAGTTTGGCAATGGGGAGGATTTCAACCCAAGGAATGGGAGATGGAATTTTAATAACAAGAAACTGGTGCAGCCAACTAAGGTAGAGCGATGGGCTGTGGCGAACTTTTCTGCTCGTTGTGATGTCAAAAGTCTTATTCGGGATCTGACTAGAGTTGCAGCTGCCAAAGGAGTTGAGATAGATGCCCCTTTTGATGTATTTGAAGAAAATCCGCAGTTCAGGCGTGCCCCGCCTATGGTTAGAGTGGAGAAGATGTTTGAAGACATCCAGTCTAAACTTCCCGGCGCTCCTCAGTTTCTTCTTTGTCTTCTTCCTGAACGGAAAAACTGTGATATTTATGGTCCATGGAAAAAGAAGAATCTTGCTGACTTTGGAATTGTTAATCAGTGCTTGTGTCCACAAAGGGTCAACGACCAATATCTTACTAATTTGTTGTTGAAGATCAATGCAAAGCTAGGTGGGTTGAATTCATTATTAGCTGTTGAAAGATCTCCTTCTATGCCTTCTGTTTCCAAAGCTCCTACCCTTATTCTTGGGATGGACGTGTCTCATGGCTCACCTGGGCAGTCTGATATACCTTCCATTGCAGCGGTAGTAAGTTCCAGACAGTGGCCTTTGATATCAAAGTATAGGGCATGTGTCCGCACCCAGTCTCCAAAAGTTGAAATGATAGATAATTTGTTCAAGCCAGTAGCTGAAAAGGAAGATGAAGGCATCATCAGGGAACTTCTGGTTGATTTCTATTCAAGTTCTGGGAAGAGAAAGCCAGAAAATATAATCATTTTCAGGGATGGTGTGAGTGAATCACAATTCACTCAAGTATTAAATGTTGAGCTTGATCAGATCATTGAGGCTTGTAAGTTTCTTGATGACCAGTGGAACCCTAAATTTGTAGTGATTGTTGCTCAGAAAAATCACCACACGAAATTTTTCCAGCCTGGGTCTCCTGATAATGTTCCCCCTGGAACTGTTATCGACAATAAAATTTGTCATCCACGGAATTATGATTTCTACTTGTGTGCACATGCTGGAATGATTGGAACCACCAGGCCTACACATTATCATGTTCTGTTGGATGAGATTGGTTTCTCAGCAGATGATCTACAGGAACTCGTGCATTCTCTGTCATACGTGTATCAGCGGAGCACCACTGCCATCTCCGTCGTTGCTCCAATATGCTACGCACACCTGGCTGCAACTCAATTGGGACAGTTCATGAAATTCGAGGACAAGTCCGAGACATCATCGAGCCATGGCGGGACTTCTGCCGGGGCTGTTCCCATTCCTCAGTTACCCAAGTTGCAGGACAATGTCTGCAACTCAATGTTCTTCTGTTGA 3009 0.4427 MQNVAKNVSRQSLQSRRNQRSRLFTSRTLTVSTWFCSGSEVLGFCSVFLIQFVWKLFCKKFRFLSSGLSVFSLEFWVFRYLVSSESLLDMDLFEPDGNGNEESLPPPPPPPEVPPNVVPVKADEAIPPEPIKKKASRVPIARRGLGSKGSKLPLLTNHFKVNVTNNEDHFFQYSVALYYEDGRPVEGKGVGRKVIDRVQETYDSELAGKDFAYDGEKSLFTVGPLPRNKLEFTVVIEDVTSNRNNGNCSPDGQGSPNESDRKRMRRPYRAKTFKVEISFAAKIPMSAIASALRGHESENFQEAIRVLDIILRQHAAKKGCLLVRQSFFHNDPMNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPYSLDWAKAKRTLKNLRITTSPSNQEFKISGLSELPCRQQTFTLKNKGGDDGSEEVTVYDYFVNHRKIDLRYSADLPCINVGKPKRPTYFPIELCSLVSLQRYTKALTTLQRASLVEKSRQKPQERMKVLSDVLRTSKYDSEPMLRTCGISISTGFTQVEGRVLPAPRLKFGNGEDFNPRNGRWNFNNKKLVQPTKVERWAVANFSARCDVKSLIRDLTRVAAAKGVEIDAPFDVFEENPQFRRAPPMVRVEKMFEDIQSKLPGAPQFLLCLLPERKNCDIYGPWKKKNLADFGIVNQCLCPQRVNDQYLTNLLLKINAKLGGLNSLLAVERSPSMPSVSKAPTLILGMDVSHGSPGQSDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKPVAEKEDEGIIRELLVDFYSSSGKRKPENIIIFRDGVSESQFTQVLNVELDQIIEACKFLDDQWNPKFVVIVAQKNHHTKFFQPGSPDNVPPGTVIDNKICHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETSSSHGGTSAGAVPIPQLPKLQDNVCNSMFFC 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2440 1002 FunFam Protein argonaute 3 724 1002 - -
Bisa09g2440 1002 Pfam PAZ domain 377 503 IPR003100 GO:0005515
Bisa09g2440 1002 ProSiteProfiles Piwi domain profile. 656 964 IPR003165 GO:0003676
Bisa09g2440 1002 Pfam Argonaute linker 1 domain 323 371 IPR014811 -
Bisa09g2440 1002 Gene3D - 723 1002 IPR036397 GO:0003676
Bisa09g2440 1002 SMART Piwi_a_2 656 964 IPR003165 GO:0003676
Bisa09g2440 1002 Pfam Argonaute linker 2 domain 513 559 IPR032472 -
Bisa09g2440 1002 CDD PAZ_argonaute_like 373 486 - -
Bisa09g2440 1002 SUPERFAMILY Ribonuclease H-like 641 962 IPR012337 -
Bisa09g2440 1002 MobiDBLite consensus disorder prediction 243 266 - -
Bisa09g2440 1002 CDD Piwi_ago-like 531 958 IPR045246 -
Bisa09g2440 1002 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 129 966 - -
Bisa09g2440 1002 SMART DUF1785_2 321 373 IPR014811 -
Bisa09g2440 1002 FunFam Protein argonaute 7 368 491 - -
Bisa09g2440 1002 ProSiteProfiles PAZ domain profile. 398 487 IPR003100 GO:0005515
Bisa09g2440 1002 Pfam N-terminal domain of argonaute 152 311 IPR032474 -
Bisa09g2440 1002 Pfam Piwi domain 657 964 IPR003165 GO:0003676
Bisa09g2440 1002 Pfam Mid domain of argonaute 566 647 IPR032473 -
Bisa09g2440 1002 Gene3D paz domain 367 491 - -
Bisa09g2440 1002 Gene3D - 551 717 - -
Bisa09g2440 1002 SUPERFAMILY PAZ domain 368 527 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2440 Bisa-ChrBisa09 45348412 45361835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2440 131 1002 Eukaryotic Initiation Factors Gene Family AT5G43810 35.895 6.05e-167 513