Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2430 ATGGCCAAGAAGCGAAAGCTGCCCCCTTCTGCGCCCGAAGCTGCTGACGTCTCTGAAGAGCAGCAAATTTATCCGGAGACTGAAGCAGCTCCAGAAGAAGAGCACCACCAAGAACGCGAAAATATGGCCGTTGATGATGATAATACCCAAGGAGAAGAAGAAGAAGTTGAAGGAGAAGAAGAAGTTGAAGATGGAGAAGAACAAGAAAATGCTGAAGAGCAAGAAAGTGAGCACCTGGAAACTGCAGAAGGTTCGAACGATGTAGCTCTAGCTGAATCAGCTCAGATAGAAGAAGGTAACGAGAATGAAGATGAAGGGGAGGATTTAGAGGAGGAGACTGTGGAGAAGCTTCTGGAGCCCTTTACAAAGGAGCAGCTGTTCTCGCTTGTCAAGCAGGCTGTGGAAAAGTACCCAGATTTCTTGGAGAACGTTTGTCAGCTGGCAGATGTGGACCCTGCGCACCGGAAAATTTTTATCCATGGACTTGGCTGGGATGCCAATGCTGAAATACTTACTAGTGTGTTTGGGAAGTATGGCGAGATTGAGGATTGTAAGGCCGTCACTGATAAGGTCTCTGGGAAATCCAAGGGCTATGCTTTCATCTTGTTTAAACACCGAAGCGGGGCTCGTAAGGCGCTGAAGCAACCACAGAAGAATATTGGGAATCGGATAACTTATTGTCAATTGTCCTCAGCTGGACCTGTTCAAGCTCCCCCAGCCGTAGCAGCACCCATCTCTGTTTATACTCAGAAGAAGATCTTTGTGAGCAATAGGAGGGTCCATTGGGCCTTGATAAGCAGACAGGAAGGCCTAAGGGGTTTGCATTTTTTGTTTACAAGTTGGCAGAAAGTGCTAAGAAGGCTTTGGAGGAGCCACACAAGAACTTTGAGGGGCATACATTGTATTGTCAGAGGGCAGTTGATCGTCCTAAGGGAGATAAGGGTTATCATCAACAGCATCAGCTCCATTCGCATCATCATCATCATCAGCCTCACCACCACTCAAGGAAGGAGAAGAATAAATATTTTTCTGGCAGGCCAGGACCAGGAAACCTGA 1056 0.4725 MAKKRKLPPSAPEAADVSEEQQIYPETEAAPEEEHHQERENMAVDDDNTQGEEEEVEGEEEVEDGEEQENAEEQESEHLETAEGSNDVALAESAQIEEGNENEDEGEDLEEETVEKLLEPFTKEQLFSLVKQAVEKYPDFLENVCQLADVDPAHRKIFIHGLGWDANAEILTSVFGKYGEIEDCKAVTDKVSGKSKGYAFILFKHRSGARKALKQPQKNIGNRITYCQLSSAGPVQAPPAVAAPISVYTQKKIFVSNRRVHWALISRQEGLRGLHFLFTSWQKVLRRLWRSHTRTLRGIHCIVRGQLIVLREIRVIINSISSIRIIIIISLTTTQGRRRINIFLAGQDQET 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2430 351 MobiDBLite consensus disorder prediction 28 46 - -
Bisa09g2430 351 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 157 222 IPR000504 GO:0003723
Bisa09g2430 351 SMART rrm1_1 156 228 IPR000504 GO:0003723
Bisa09g2430 351 Gene3D - 147 233 IPR012677 -
Bisa09g2430 351 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 155 232 IPR000504 GO:0003723
Bisa09g2430 351 SUPERFAMILY RNA-binding domain, RBD 152 258 IPR035979 GO:0003676
Bisa09g2430 351 MobiDBLite consensus disorder prediction 1 87 - -
Bisa09g2430 351 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 47 257 - -
Bisa09g2430 351 MobiDBLite consensus disorder prediction 47 74 - -
Bisa09g2430 351 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2430 Bisa-ChrBisa09 45238255 45239371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2430 110 247 C2H2 Transcription Factor Family AT2G19380 41.429 2.89e-31 122