Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2390 ATGAGGAAGAAACTCGATACTCGTTTCCCAGCTGCTCGGATTAAGAAAATTATGCAAGCTGATGAAGATGTTGGGAAGATTGCAATGGCAGTACCCCTTCTTGTTTCTAAAGCACTTGAACTCTTTCTGCAAGATTTATGTGATCGGACATATGAAATAACTTTGAGGAGGGGGGCAAAGACCATGAATTCTTTTCATTTGAAACAGTGTGTACAGACTTATAATGTCTTTGATTTTCTCAAAGATATTGTCAGCAAGGTTCCTGATTTAGGTGGTCATGTGGCTTCCGGAGATGATCGAACTGTCTGTAAAAGAAGGAAAGTTGATGATGATGGAAATGACAGCGATGATGATCTAAAAAGAATTAAGACGCCAGAACATTCTCATCATACTGGTGGTAGAGGAAGAGGCCGGGGCAGAGGCAGGGGTCGTGGTCGAGGAGGTAGAGTAGCAGTAGATCGAGAGATGACTACACATGTCAAGTTTGAAGATCATCATCATCATGATAGATTTAATCAAAATGACATGCACACTCAAAGCAATGAAAGTATGGAAAATAGCACAGAACATGAAGAAGTCAAGCCTCCTGTTAGCAAACCAGCTGTAACATGCGTCAGAAATTTTGACTTAAATATGGATCCGGATAAGGACAGTGATTCGCCAACCAGTTTAGCTCCCACCCCGCCTAGTTTACCTGAAAAACCAACTATAGAATTAAAGCATGAGGAATTCCCTGGCTGGTCATATTCCGATATGGAAAAAATGGCCATTGATCCCATGAAACTGGTCAACTTAAATGGACTGATTGATGAAGAGGAGGAAGATTATGATGAAGAAAGTTAG 843 0.4093 MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNSFHLKQCVQTYNVFDFLKDIVSKVPDLGGHVASGDDRTVCKRRKVDDDGNDSDDDLKRIKTPEHSHHTGGRGRGRGRGRGRGRGGRVAVDREMTTHVKFEDHHHHDRFNQNDMHTQSNESMENSTEHEEVKPPVSKPAVTCVRNFDLNMDPDKDSDSPTSLAPTPPSLPEKPTIELKHEEFPGWSYSDMEKMAIDPMKLVNLNGLIDEEEEDYDEES 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2390 280 MobiDBLite consensus disorder prediction 209 238 - -
Bisa09g2390 280 FunFam dr1-associated corepressor homolog 1 86 - -
Bisa09g2390 280 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Bisa09g2390 280 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 163 - -
Bisa09g2390 280 Coils Coil 262 280 - -
Bisa09g2390 280 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
Bisa09g2390 280 MobiDBLite consensus disorder prediction 105 197 - -
Bisa09g2390 280 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Bisa09g2390 280 MobiDBLite consensus disorder prediction 105 132 - -
Bisa09g2390 280 MobiDBLite consensus disorder prediction 146 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2390 Bisa-ChrBisa09 43670885 43673729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2390 1 126 CCAAT-HAP5 Transcription Factor Family AT3G12480 70.677 6.91e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bisa09g2390 CBFD_NFYB_HMF 3.5e-18 CL0012