Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2335 ATGGGCAACTGCTGCTCCGGGGGCACCGACTCCGACGCTGCCCCTGCGGAGGCCGACGCCGGTGCCAATGGCTCGGTGGCCAAGCGAGAATCCCTCAACAACTCTAGTGCGGGCGCCAACAGCGCTCACCAGCACAGCTCCGGAGTTGGCGGGGGCGAGGAGCCACCGAAATCCCCCTCCGCCACAGGGAAACCGTCTGCCTCGGCGTCGAAGGGGAAGATCGGTGCGATCGGCCCGGTGCTCCAGCGGCCCATGGAGGACGTGAAGGCGACGTACAGCATGGGGAAGGAGCTGGGGCGGGGGCAGTTCGGGGTGACGCATCTGTGCACGCACAAGGCGACGGGGCAGAAGTACGCGTGCAAGACGATCGCGAAGAGGAAGCTGTCGAACAAGGAGGACATCGAGGACGTGAGGAGGGAGGTGCAGATCATGCACCACCTTGCGGGGCAGAACAACGTGGTGGAGCTGAAGGGCGCGTACGAGGACAAGAATTCGGTGCACCTGGTGATGGAACTGTGCGCCGGGGGTGAGCTCTTCGATCGGATCATAGCCAAGGGGCACTACACCGAGCGAGCCGCCGCCTCACTCATGAGGACCATTGTTCAGATCGTCCACACCTGCCATTCCATGGGAGTCATCCACAGAGATCTCAAGCCCGAGAATTTCTTGCTGCTCAATAAGGACGAGGACTCTCCTCTCAAGGCCACGGATTTTGGTTTATCCGTTTTCTACAAAGAAGGGGAGACATTTAAAGATATTGTGGGCAGTGCATACTATATTGCTCCTGAGGTCTTGAAAAGGAAATATGGACCAGAAGTTGATATATGGAGTATTGGTGCCATGCTCTACATTCTTCTATGTGGTTCTCCTCCATTTTGGGCAGAATCCGAGACTGGCATATTCAACGCCATCTTACGAGGCCACGTAGATTTCTCAAGCGATCCATGGCCGTCCATATCACCATCAGCTAAAGATCTTGTAAGGAAAATGTTGAATTCAGATCCCAAGGCCAGACTCACAGCCTACCAAGTTCTAAATCATCCATGGATTAAGGAGGATGGGGATGCACCCGATGTACCTCTTGACAACGCTGTGCTCAACAGGCTCAAGCAGTTCAAAGCAATGAATCAATTCAAGAAAGCTGCTCTAAGGGTGATTGCTGGGTGCTTGTCGGAGGATGAAATCATGGGATTGAAGGAAATGTTCAAAAGCATGGACACGGACGGCAGTGGAACCATTACAATAGAAGAGCTTAAAAAAGGACTTGCTGAACAAGGTTCTAAGCTCACCGAACAAGAAGCTACCCAATTAATGGAAGCTGCTGATGCTGACGGCAACGGCCTAATAGATTATGACGAGTTCATCACAGCAACGATGCAGTTGAACAGAATGAACAAAGAAGAACATCTTTATACTGCCTTCCAATACTTTGATAAAGATAACAGCGGGTTCATTACAAAAGAAGAACTAGAACAAGCTCTCCATGAATTTAAGATGCACGATGGCAGGGACATCGATGAAATCATTTCAGAAATTGATTCAGATAATGATGGACGGATTAACTATGATGAGTTTACGGCTATGATGAGAAAAGGAAACCCTGATGCCGTGACCTGCAAGAAGAGACGTGATTCAATTCTTTGA 1644 0.5128 MGNCCSGGTDSDAAPAEADAGANGSVAKRESLNNSSAGANSAHQHSSGVGGGEEPPKSPSATGKPSASASKGKIGAIGPVLQRPMEDVKATYSMGKELGRGQFGVTHLCTHKATGQKYACKTIAKRKLSNKEDIEDVRREVQIMHHLAGQNNVVELKGAYEDKNSVHLVMELCAGGELFDRIIAKGHYTERAAASLMRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDEDSPLKATDFGLSVFYKEGETFKDIVGSAYYIAPEVLKRKYGPEVDIWSIGAMLYILLCGSPPFWAESETGIFNAILRGHVDFSSDPWPSISPSAKDLVRKMLNSDPKARLTAYQVLNHPWIKEDGDAPDVPLDNAVLNRLKQFKAMNQFKKAALRVIAGCLSEDEIMGLKEMFKSMDTDGSGTITIEELKKGLAEQGSKLTEQEATQLMEAADADGNGLIDYDEFITATMQLNRMNKEEHLYTAFQYFDKDNSGFITKEELEQALHEFKMHDGRDIDEIISEIDSDNDGRINYDEFTAMMRKGNPDAVTCKKRRDSIL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2335 547 Pfam Protein kinase domain 92 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g2335 547 ProSitePatterns EF-hand calcium-binding domain. 513 525 IPR018247 -
Bisa09g2335 547 Pfam EF-hand domain pair 398 458 IPR002048 GO:0005509
Bisa09g2335 547 Pfam EF-hand domain pair 467 530 IPR002048 GO:0005509
Bisa09g2335 547 ProSitePatterns EF-hand calcium-binding domain. 406 418 IPR018247 -
Bisa09g2335 547 FunFam Calcium-dependent protein kinase 1 94 177 - -
Bisa09g2335 547 ProSiteProfiles EF-hand calcium-binding domain profile. 504 535 IPR002048 GO:0005509
Bisa09g2335 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Bisa09g2335 547 ProSiteProfiles EF-hand calcium-binding domain profile. 465 500 IPR002048 GO:0005509
Bisa09g2335 547 Gene3D Phosphorylase Kinase; domain 1 94 177 - -
Bisa09g2335 547 FunFam Calcium-dependent protein kinase SK5 260 355 - -
Bisa09g2335 547 CDD STKc_CAMK 92 349 - -
Bisa09g2335 547 Gene3D Transferase(Phosphotransferase) domain 1 178 357 - -
Bisa09g2335 547 ProSitePatterns EF-hand calcium-binding domain. 442 454 IPR018247 -
Bisa09g2335 547 SMART serkin_6 92 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g2335 547 PANTHER SERINE/THREONINE-PROTEIN KINASE 86 525 - -
Bisa09g2335 547 ProSitePatterns EF-hand calcium-binding domain. 478 490 IPR018247 -
Bisa09g2335 547 FunFam Calcium-dependent protein kinase 1 358 533 - -
Bisa09g2335 547 MobiDBLite consensus disorder prediction 27 47 - -
Bisa09g2335 547 SUPERFAMILY EF-hand 390 530 IPR011992 -
Bisa09g2335 547 ProSiteProfiles EF-hand calcium-binding domain profile. 393 428 IPR002048 GO:0005509
Bisa09g2335 547 Gene3D - 358 533 - -
Bisa09g2335 547 FunFam CDPK-related kinase 3 84 252 - -
Bisa09g2335 547 ProSiteProfiles EF-hand calcium-binding domain profile. 429 464 IPR002048 GO:0005509
Bisa09g2335 547 SUPERFAMILY Protein kinase-like (PK-like) 80 376 IPR011009 -
Bisa09g2335 547 SMART efh_1 397 425 IPR002048 GO:0005509
Bisa09g2335 547 SMART efh_1 504 532 IPR002048 GO:0005509
Bisa09g2335 547 SMART efh_1 433 461 IPR002048 GO:0005509
Bisa09g2335 547 SMART efh_1 469 497 IPR002048 GO:0005509
Bisa09g2335 547 MobiDBLite consensus disorder prediction 1 80 - -
Bisa09g2335 547 ProSiteProfiles Protein kinase domain profile. 92 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g2335 547 ProSitePatterns Protein kinases ATP-binding region signature. 98 125 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2335 Bisa-ChrBisa09 41580028 41587581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2335 1 546 EF-hand Containing Proteins AT5G12180 77.656 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa09g2335 Pkinase 4.5e-76 CL0016