Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2313 ATGGATCATCCACCTATTACTTTCTCAGCTTCGGCCTGCGAATCCGTGTCCTCCGGCGAACCCTCCTACCACGACACGCCTCCAGCACCTAAGAGACGCCGAGGCAGGCCACAAGGTTCGAAGAACAAGCCCAAGGCACCTCCTGTCGTCACCGGCAACCGATCTGACAATCTCGCCGTTATCGAAATCCCCGCCGGAGCCGACTTGACGGACTCGCTCCTCCGATTCTCGCGCCGCCGGCGATTGTCCATCATGGTGCTCACTGCGTCGGGGTCGATTTCGATCGCCAACCTCCGCTGCCCGTCGAATTCCACCGAAAGCACCTTCACCGCCGTCGGCTCCTTCTCCATACTGTCCCTTTCCGGGACCGTCGCGGAAAACTCATCTTCGTTAGTCACTCTTCTTGGGCGAACCGGAGGCGAAGTATTTGGCGGAAGGATCGCAGGGAGCGTGCTGGCGGCGAGTAAAGTGAATGTGGTGGCGGCGACTACTAAGTTAGAGGACTCTATGTTTCAGAGGCTCGCCGGCGACGGGGATGATAACAATAGCGACGACAGTAACCGCTGCTACAGTAATAATGGTTCGAGTTCTGAATATAATTTGACTGCTGCTTTGGCTCTATCTGATGAATCGCCCCTTGGTGAAGTATTGAGAGAATGCGATGCACTTCAGCGATCTCACTCTCAACACTAA 693 0.557 MDHPPITFSASACESVSSGEPSYHDTPPAPKRRRGRPQGSKNKPKAPPVVTGNRSDNLAVIEIPAGADLTDSLLRFSRRRRLSIMVLTASGSISIANLRCPSNSTESTFTAVGSFSILSLSGTVAENSSSLVTLLGRTGGEVFGGRIAGSVLAASKVNVVAATTKLEDSMFQRLAGDGDDNNSDDSNRCYSNNGSSSEYNLTAALALSDESPLGEVLRECDALQRSHSQH 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2313 230 MobiDBLite consensus disorder prediction 1 53 - -
Bisa09g2313 230 Pfam Plants and Prokaryotes Conserved (PCC) domain 59 163 IPR005175 -
Bisa09g2313 230 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 26 191 IPR014476 GO:0003680
Bisa09g2313 230 Gene3D - 58 177 - -
Bisa09g2313 230 SUPERFAMILY AF0104/ALDC/Ptd012-like 58 164 - -
Bisa09g2313 230 CDD DUF296 60 153 IPR005175 -
Bisa09g2313 230 ProSiteProfiles PPC domain profile profile. 53 187 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2313 Bisa-ChrBisa09 40966201 40966893 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2313 31 183 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.337 1.58e-22 91.3