Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa09g2307 | ATGACTTCACTTGTGAAGATCGAAGGCGAACAGCTTCCCGTGAACGATTTTCAGGATTTATCGCACAAAGATCAGAGTGAAATACGAAGTGAAGCAGAGATTCTCCAGGTGGGATCTGGTAACCATGGGGGAATCTGTGCGATTTGCTTGGATAAAATAGTACTGCAGGAAATTGCGCTCGTTAAAGGTTGCGAGCATGCTTACTGTGTGACATGCATACTTCGATGGGCCACATATAGTCCAAAAGTCACCTGCCCACAGTGTAAACATCCATTTGAGTTTTTAAATGTCCACCGCTCACTTGATGGCAGTCTTCATGACTTCATGTTCGAAGAAAGTGTTTGCTTACTCCTTAGGGCGTCATGGTTTAAACCTCTAACCGTGGAGGATAACGTTGAACATGAAGATATGTATGATGACATTGAGAATTACTATGAATATGATGATGAGGGGGATGACATAGATGATGTTTACTATGGGGCCTCATCAAGTATTCGCATAGGCAACAGGAGATGGGGAGACAACGGTTATGTTAGGGCTGGGCGTCAGCAAGCTAGGCCAGTCTATCAACCGAACTCTCTGAGCTCGGGAGCAAGTTCATCCCGTGAGCCAAAGAACAAAGAGGCTGCACGAGGTGCTACAACTGGGCGACGGGCAAAGAGAGCACTGAAACGGGAAGCTGCTGATAAGGCGGCTGCAGCGAAGCATCAGCAGCATCTGGCGAGGTTGGGCAGAAAGTGA | 741 | 0.4723 | MTSLVKIEGEQLPVNDFQDLSHKDQSEIRSEAEILQVGSGNHGGICAICLDKIVLQEIALVKGCEHAYCVTCILRWATYSPKVTCPQCKHPFEFLNVHRSLDGSLHDFMFEESVCLLLRASWFKPLTVEDNVEHEDMYDDIENYYEYDDEGDDIDDVYYGASSSIRIGNRRWGDNGYVRAGRQQARPVYQPNSLSSGASSSREPKNKEAARGATTGRRAKRALKREAADKAAAAKHQQHLARLGRK | 246 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa09g2307 | 246 | MobiDBLite | consensus disorder prediction | 204 | 236 | - | - | |
| Bisa09g2307 | 246 | MobiDBLite | consensus disorder prediction | 182 | 246 | - | - | |
| Bisa09g2307 | 246 | ProSiteProfiles | Zinc finger RING-type profile. | 46 | 89 | IPR001841 | - | |
| Bisa09g2307 | 246 | ProSitePatterns | Zinc finger RING-type signature. | 64 | 73 | IPR017907 | - | |
| Bisa09g2307 | 246 | Pfam | Ring finger domain | 46 | 89 | IPR001841 | - | |
| Bisa09g2307 | 246 | SUPERFAMILY | RING/U-box | 45 | 95 | - | - | |
| Bisa09g2307 | 246 | MobiDBLite | consensus disorder prediction | 186 | 203 | - | - | |
| Bisa09g2307 | 246 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 22 | 109 | IPR013083 | - | |
| Bisa09g2307 | 246 | SMART | ring_2 | 46 | 88 | IPR001841 | - | |
| Bisa09g2307 | 246 | CDD | RING-HC_Topors | 46 | 92 | - | - | |
| Bisa09g2307 | 246 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 246 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa09g2307 | 1 | 246 | C3H Transcription Factor Family | AT5G19430 | 56.471 | 6.44e-89 | 262 |