Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2305 ATGCAGATTGTGGCTACCACAAGGAGGTTGCCTTCAGACTCTGGCGCTTTCGCAGATTGGGCAGCCTCTTCCGCCGGCCGCCCTGCCCCCGCAGACGAGCTCTCTCTCGGCTTTAATGCAGGACCCGCCGCCGCAGCCGCCGGAACCCCCGCCGCGCCGTGGCCAGCTGCAGCTAGGTCAATCAATTACGGCCTCTCGCCGGAGATGGGCGGCATGCTTGGCCTGCGTGATCTCTTCGTCGTCGGGCCGGCATCCTCCTTCCACCATCACCAGAACCACCACCACCACCACCATCAGTCCGTGATGACCGATCCGAACCCCGCGACGGCCCTCGGCGTCGGCGTCATCCCTCTTCTGACCTCCACGCCGTGTCTCGGCGAAAACGAGTCGACGTTGATAAGTAATCGGAGCCGAGGCGGGGGAATTCAGCTGTGGCAAGACCAGGAATCGGAGCACGGTCATTATCTGAAGAAGCACGGCATCACTACGACGGCGGCGACGACGACGACGTCGTTTGAGCTCAACGATAGTTCTGGTAATTTGGTACAACACGAGAATGGCGTGACTGTTTCGGCCACCACGTGCCAGGACTGTGGAAACCAAGCGAAGAAGGACTGCAGCTACAGGAGGTGCAGGACCTGCTGCAAGAGCCGGAATTTCGACTGCCCCACTCACGTGAAGAGCACGTGGGTGCCCGAGTCTCGCCGGAGAGAACGCCGCCTCATGGCGGCCGCTGCGGCCGCCTGCGGTGGTGGTGGGTCTAGTGGGGCTACTTCTGGTGGCTCCAAGAAACCTAGACTCCTAGCTTCACAACAACAACAACAACAACAGCAGCAAACCACAACGACGTCTCGAACTTCGACTTCGAATAATACCACTCCTCCTAGAAGCTACGACACTGGCTCTAGCTATCAAGATGCAGGGTTCAAGGAGTCGTTACCGGGGCAAGTGCGGGCACCGGCGGTGTTCAAGTGTGTTCGGGTGACGGCGGTGGAAGAGGGGCAAGATGAGTATGCTTATCAGGCAGTGGTGAGGATTGGAGGCCATGTGTTTAGAGGGTTTCTGTATGATCAAGGGGTTGAGGGTAGAGATGTTTATCCTAATCTATCGGAGCTTCATTTGGGGGGCGGCGGCGGCAATGGGGACGGCGATAATGGAAGAAATGGGGCTTCATCTTCATCCCCGATGCTGGATCCGTCTGATGTTTATGCAGCTTCTGGTGGGAGCTTACTTGGAGTTTCAACTTCAGCTTATGACCATGGCTATTATGAAGCTTTTGTCTCATAG 1287 0.5765 MQIVATTRRLPSDSGAFADWAASSAGRPAPADELSLGFNAGPAAAAAGTPAAPWPAAARSINYGLSPEMGGMLGLRDLFVVGPASSFHHHQNHHHHHHQSVMTDPNPATALGVGVIPLLTSTPCLGENESTLISNRSRGGGIQLWQDQESEHGHYLKKHGITTTAATTTTSFELNDSSGNLVQHENGVTVSATTCQDCGNQAKKDCSYRRCRTCCKSRNFDCPTHVKSTWVPESRRRERRLMAAAAAACGGGGSSGATSGGSKKPRLLASQQQQQQQQQTTTTSRTSTSNNTTPPRSYDTGSSYQDAGFKESLPGQVRAPAVFKCVRVTAVEEGQDEYAYQAVVRIGGHVFRGFLYDQGVEGRDVYPNLSELHLGGGGGNGDGDNGRNGASSSSPMLDPSDVYAASGGSLLGVSTSAYDHGYYEAFVS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2305 428 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 86 406 IPR007818 GO:0003700|GO:0006355
Bisa09g2305 428 MobiDBLite consensus disorder prediction 255 309 - -
Bisa09g2305 428 NCBIfam LRP1 C-terminal domain 313 360 IPR006511 -
Bisa09g2305 428 NCBIfam putative zinc finger domain, LRP1 type 194 236 IPR006510 -
Bisa09g2305 428 Pfam Domain of unknown function (DUF702) 193 361 - -
Bisa09g2305 428 MobiDBLite consensus disorder prediction 375 398 - -
Bisa09g2305 428 MobiDBLite consensus disorder prediction 244 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2305 Bisa-ChrBisa09 40815985 40818950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2305 4 402 C2H2 Transcription Factor Family AT5G12330 47.971 1.80e-98 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bisa09g2305 DUF702 1.4e-58 No_clan