Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2303 ATGGAAGAAAAGAATTTTGTCTTTCTTTATGAAAGGCTGTGTGAGATTGAGCTGAATACAGGCGATTTGCAATCAGAAGAGAATAAAGTCTCTATGGAGAAAAATAAGAAGAGAAAACTCAAAACACCTGCCCAGGTTTCTGCCTTGGAAAAATTTTATAACGAGCACAAATATCCGACAGAGGAAATGAAATTAGAACTTGCTGAAGAGTTAGGGTTGACAGAAAAACAAGTATCTGGATGGTTTTGCCACCGAAGGCTAAAAGATAAAAGATTGTTGAAAGATGAAGCTTGTGTTAATGGACGACAGGATATTTCAAGTGGTGTCATCCAGGATCGTGGCAGTGGACTGGGGCAAGATTCATGTGGAAGCACTAAACATGGTGATTACAGGCATCTTGATCCCAAAGAGGTTGAGAGTCGTGGCCTTTATGGTCATGATCTTTTAGCTGCAGATATGGCCTATGAACGTAGGAATCATTATTCTGGAAATGCTAGCGCAATGGATGACACATCATCTGAGAGTAGCTCATCTTTGCGAGATCAGGATTCATATGGAGCTGAACCTTCTAGATATCTAGCACCTAATGGAGTGCTACCTTCTATAAATCCCAAGGGTGCTATTAACATGAGGTACAAACCATCAGGTTATCTGAAAGTGAAGGGAGAGATAGAAAACCCTGCTATAACTGCTGTTAAGAAGCAATTAGGGAGGAATTATAGGGAAGATGGTCCGCTTCTTGCTATAGAATTTGATCCACTTCCTCCAGGGGCATTTGAGTGTCAAATTGCAGATCCAGTTCATGAACAATACTATATTGCAAATCCTGCTCTTCCCAATTCTCCAGAAATTTCTGCTGTGAAAAGGCAACCCAGTCTTAGCTCTAGATATGATTCATATAATACCAAACTTATTTCCCAAGATTCACATATGGAAGGAGCAGATCACTCTGATTTCCAGAGTAAGAAATCTCGCCAGCATTCAAAGCAAAGACTGCCTTTGTACAGTTATACTAATCCTTTGCCTCGCGGGAACTCTTCCCTGGATTTGTATGAACATTCTACTGGGGAAGCATCTGCCTATAATAACAAGAATCATAGAGTTAGAACTAAGCATGGTTTTGAAGGGATGAAATCTGATTCTGCTTCTAACCATAGTGATCACTATGAAGGGAACCTTGTGGTAAACCCAACAGACTCACTGCTGCATGGTCATGATAATATCAATGTGAAGAATGTGCAAAGGGGTGAATATATACGATCCAAGCCTTCTAATCCAATCAGTAATCCTTGTGTTTCCGTGGATCTCGAAGATAGAGGCCTATCTACTAGGATGGTAAAGGAGAAGATGTCTAGTGGTGATAGAAAGTCTAGAAAACAATATGATGATTCAGGTGGATTAAGGATGCCTTCAAATGAAATCCTGGTGAGTTTTAGCTGCATAAACTTATCCACAGCTACTGCTGCAAAACGTGGTGTTGATCTACCTCTACAACATAATGTTAAACAAGAAACTGTTGCTGGGACGCAACCACAGAGAAGTCAGAGATCTGCCATGGAAATGCCATCTAGCTTTAGTGAGGATGAAACTGCCAATACCAGCTCCTCTATGGATTAA 1617 0.4057 MEEKNFVFLYERLCEIELNTGDLQSEENKVSMEKNKKRKLKTPAQVSALEKFYNEHKYPTEEMKLELAEELGLTEKQVSGWFCHRRLKDKRLLKDEACVNGRQDISSGVIQDRGSGLGQDSCGSTKHGDYRHLDPKEVESRGLYGHDLLAADMAYERRNHYSGNASAMDDTSSESSSSLRDQDSYGAEPSRYLAPNGVLPSINPKGAINMRYKPSGYLKVKGEIENPAITAVKKQLGRNYREDGPLLAIEFDPLPPGAFECQIADPVHEQYYIANPALPNSPEISAVKRQPSLSSRYDSYNTKLISQDSHMEGADHSDFQSKKSRQHSKQRLPLYSYTNPLPRGNSSLDLYEHSTGEASAYNNKNHRVRTKHGFEGMKSDSASNHSDHYEGNLVVNPTDSLLHGHDNINVKNVQRGEYIRSKPSNPISNPCVSVDLEDRGLSTRMVKEKMSSGDRKSRKQYDDSGGLRMPSNEILVSFSCINLSTATAAKRGVDLPLQHNVKQETVAGTQPQRSQRSAMEMPSSFSEDETANTSSSMD 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2303 538 MobiDBLite consensus disorder prediction 110 134 - -
Bisa09g2303 538 MobiDBLite consensus disorder prediction 305 340 - -
Bisa09g2303 538 MobiDBLite consensus disorder prediction 164 184 - -
Bisa09g2303 538 SMART HOX_1 34 96 IPR001356 GO:0003677
Bisa09g2303 538 SUPERFAMILY Homeodomain-like 34 101 IPR009057 -
Bisa09g2303 538 ProSiteProfiles 'Homeobox' domain profile. 32 92 IPR001356 GO:0003677
Bisa09g2303 538 Gene3D - 25 104 - -
Bisa09g2303 538 Pfam Homeodomain 36 91 IPR001356 GO:0003677
Bisa09g2303 538 MobiDBLite consensus disorder prediction 502 538 - -
Bisa09g2303 538 MobiDBLite consensus disorder prediction 443 468 - -
Bisa09g2303 538 MobiDBLite consensus disorder prediction 499 538 - -
Bisa09g2303 538 MobiDBLite consensus disorder prediction 443 463 - -
Bisa09g2303 538 MobiDBLite consensus disorder prediction 309 325 - -
Bisa09g2303 538 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 21 538 - -
Bisa09g2303 538 CDD homeodomain 36 91 IPR001356 GO:0003677
Bisa09g2303 538 MobiDBLite consensus disorder prediction 164 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2303 Bisa-ChrBisa09 40668015 40674501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2303 19 538 Homeobox Transcription Factor Family AT4G03250 40.550 1.18e-85 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Bisa09g2303 Homeodomain 1.8e-17 CL0123