Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2293 ATGTCTGAAAGAGATTCCACTAAGCTTTTAGCCTTTTGGAAGATTCTCTGCATATTCATGTCTTTATGTGTGAAGATTTCTTCATCTTCAGAAGCAAGTGCTCTGCTGACGTGGAAGGCCAGCCTTCACAAAAAAAGCCAAGAAACCTTGTCTTCTTGGAAGAATGGCACTAATCCTTGCACAAATTGGAAAGGGATTACATGTGATGAATCCTTCGTGTCTGTGACCGCGATCAACCTCACAAGCCTTGGGCTACAAGAGATTGCTTACATCATGGAGGCAAATGAAAAGTGTGATGTATATAGTTTTGGGGTATTGACTTTGGAAATCATAATAGGAATTCACCCAGGAGAGTTTATTTATTCTTTAAAAGAGACATCAGTTACAAATGACTTGTTGTTGAAGGATCTGTTGGACCCACGTCTTCCTCTACCCACAAAGCCAATTATTGAGGAAGTAATATTGATTTCAAAATTAGCATTTGCTTGCTTGAATGACAATCCACAATCCCGTCCAACCATGGAACAAGTATCTATGAAACTTGTGAAGCCAATATCTCATTTTGTGGACCAGTTTGACACTATTACAATTACACAACTCATGAGAGAATGA 612 0.3889 MSERDSTKLLAFWKILCIFMSLCVKISSSSEASALLTWKASLHKKSQETLSSWKNGTNPCTNWKGITCDESFVSVTAINLTSLGLQEIAYIMEANEKCDVYSFGVLTLEIIIGIHPGEFIYSLKETSVTNDLLLKDLLDPRLPLPTKPIIEEVILISKLAFACLNDNPQSRPTMEQVSMKLVKPISHFVDQFDTITITQLMRE 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2293 203 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Bisa09g2293 203 Pfam Protein tyrosine and serine/threonine kinase 92 181 IPR001245 GO:0004672|GO:0006468
Bisa09g2293 203 PANTHER LEUCINE RICH REPEAT KINASE 2 86 185 - -
Bisa09g2293 203 SUPERFAMILY Protein kinase-like (PK-like) 92 185 IPR011009 -
Bisa09g2293 203 Gene3D Ribonuclease Inhibitor 27 90 IPR032675 -
Bisa09g2293 203 Gene3D Transferase(Phosphotransferase) domain 1 91 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2293 Bisa-ChrBisa09 40244518 40249684 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2293 87 184 Receptor kinase-like Gene Family AT1G75820 35.455 7.37e-11 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa09g2293 PK_Tyr_Ser-Thr 2e-05 CL0016