Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2286 ATGTCTGAAAGTGTTCCCGCTTTGCTTTTATCATTTTGGCGTATCCTCTGCATATTCCTCTGTTTCTTTGTGAAGCTTTCTTCATCTTCAGAAGCAAGTGCTCTGCTGACGTGGAAGGCCAGCCTTGACGAACAAAGCCAAGAAACCTTGTCTTCATGGAAGAATGGCACTAGTCCCTGCAGAAACTGGAAAGGGGTTACATGTGATGGATCCACCATGTCTGTCTCCATGATCAACCTCGCAGGCCTTGGGCTACAAGGTAGACTCGACAATCTCACCTTCTCATCCTTCCCTAACCTCACCTCTTTTGATATCAGTAACAATTCGTTTTATAGTAACATTCCCCCTCAAATTGGTGATTTGTCCAGTATTTTGAAATTGAGTATGGCCCTAAATAAATTAAGTGGTCCAATACCTCGTGAAATAGGGGCATTGAGAACTCTAGAGCACCTTGACATTGGAGGATGCAATCTCGCTGGGTCAATTCCTATAGAAATTGGGAATATGACCAATCTGATAGATCTAATGATTGAAACTAATCACCTTTCTGGTTCAGTTCCTCAAGAAATTGGAATGTTGAGTAGTCTTGTGTATCTTGATTTGTCAGAAAACTATTTGATATCTGGTGGAGTTCCTTCTACAATAGGAAACTTGAGCAAATTAGCACTACTTTACCTTTCCACCAACAGTCTCACTGGTCCCATTCCTGATGAACTTGGAAAACTCTATTCCTTGAATAAAATTCAAATGTTTGCTAACGATTTCTCTAGTTCAATTCCACCATCCCTGGGAAACCTGACAAAGCTTGAGGAATTCAGTCTTAAAAGGAACAAACTTTCTGGTTCAATTCCTGCCTCTTTAGGAAGGTTGGTCAATTTGCAATGGCTTGATCTCTCTGAAAACAATCTTTCTGGACCCATTCCTTCAACCTTAGGAAATTTGACAAAGCTCGCTAACCTACAATTGTATGTGAACAAATTCACGGGTAGTATTCCCTCTGAATTGAGCAACCTTACCAACTTGCGAAATCTTCAACTAGGTGATAATGATTTTGTTGGTCATTTGCCTCAAGTTTGCCTCGGTGGATCACTAGAAAGATTTGTTGCCAAGAATAATCATTTTACTGGTCCATTTCCAATAACCTTAAAGAATTGTTCTAGCCTTTTCAGACTCAGGCTTGACGATAACCGGTTGGTTATAAATATGACAGACGATTTTGGTGTGTATCCAAATCTGGACTACATTGATCTGAGTGGAAATGAATTGCATGGCCGTTTATCATCAAATTGGGGAAAGTGCACTAATCTCACATCCCTCAGGATTTCTAACACCAATCTTTCTGGGAAAATACCACCAGAACTAGGAGAGGCATCCAAGTTGCAAAGACTTGACCTCTCTTCAAATAATTTGATAGGGAAAATTCCAAAAGAACTAGGGAAGTTGAGCTCACTGGGTGAACTATTTCTGAGCAATAATAAATTTTCTGGCAAAGTTCCCTCAGAAATAGGATCACTGGAGAAACTCACAAAATTGGAGCTAGCAGCAAATAATTTTAGTGGGCCAATCACAAAAGAGATTGGAAGATTACGCATGTTGTCGCTCTTGAATTTGAGCAAAAATAACTTTGAGCAAAGCATTCCTTCTAATTTTGGCCAATTACAAGATCTTGAACAACTCGATCTTAGTTATAACTCTTTGAACGGAGCAATACCAGCAGAACTTGGATATCTGACAAGGTTGATGACATTGAATCTCTCACATGATAATCTCTCTGGCTACATTCCATCTAGTTTTGATAACATGAAAGCTTTGACCTTTGTTAACATATCATACAACCAATTAGAGGGCCCTCTTCCAAACACTACAGCCTTTCGTGATATTACATTCGAAGCACTGAGGAATAATAAAGGCTTATGTGGTAATGTTGCTGGCTTAGATTTTTGCAATGAAGTCAGTAATAATTCAAATGGCCATAAGAGGAAAAAAGTCAAGCTATTGATAATATTTCTTACTTTGGCCACATTGTTGATAATTGTAGTTGGAATTTCTTTCCTCTTTTATAGAAGAGCAAGAAAAGCAGAAACTCAGGATGAAAAAGCACAATCTCAAGATCTTAGTTTTGTATGGCATGATGATAGAGAAATAATGTATGAAAATGTCATTGAAGCCACAAAATTTTTCGACAATAGATATCTTGTTGGCAAGGGTGGCCAAGGAAGTGTTTATAAGGCAGAGTTGTCCACAGGTCAAGCTGTTGCAGTGAAGAAGCTTCATTTACTACCAGATGGGGAAATCACCAACCTAAAAGCTTTCACAAGTGAGGTTCGAGCCTTGACAGAAATCAAACATCGTAACATTGTGAAGTTGTATGGGTTTTGTTCAAACTCTCAATTTTCTTTTCTAGTTTATGAATTCTTAGAAGGAGGCAGCTTGAATGAGATATTAAAGAATGAGAAACAAGCCATTGAACTTGACTGGAGCAAGAGAGTGAATGTTGTAAAAGGAGTGGCTAATGCTCTATTCCATATGCACCATGGATGCTCATTTCCTATAATTCATCGTGACATATCAAGCAAGAATGTTCTTCTAAATTTGGAATATGAAGAAGCTAAACTCATTGACTTTGGAACAGCCAAGTTTCTGAACCCGAACTCAAACAACATGACCTTATTTGCAGGAACCTTTGGATATGCTGCTCCAGAGATTGCTTATATCATGGAAGCAAATGAGAAATGTGATGTGTACAGCTTTGGAGTATTGACGTTAGAGATCATGATGGGAATGCATCCGGGAGAGCTTATTGTTTCTTTCACTGAGACACCGACAACATATGATCTAACATTGAAAGATTTGTTGGATCAACGACTTCCTCAACCTGAGAACTCAGTAGTTGAAGAAGTGATGTTGATAGCAAAAATAGCATTTGCTTGCTTGAATAAAAATCCACAATTTCGTCCAACTATGGAACAAGTATCTATGGAGCTTCTAATGCCAAAATTTCCTTTGATAGATCAATTCCCAACAATCACCCTTAGACAACTCATGAAAGATTAA 3054 0.3851 MSESVPALLLSFWRILCIFLCFFVKLSSSSEASALLTWKASLDEQSQETLSSWKNGTSPCRNWKGVTCDGSTMSVSMINLAGLGLQGRLDNLTFSSFPNLTSFDISNNSFYSNIPPQIGDLSSILKLSMALNKLSGPIPREIGALRTLEHLDIGGCNLAGSIPIEIGNMTNLIDLMIETNHLSGSVPQEIGMLSSLVYLDLSENYLISGGVPSTIGNLSKLALLYLSTNSLTGPIPDELGKLYSLNKIQMFANDFSSSIPPSLGNLTKLEEFSLKRNKLSGSIPASLGRLVNLQWLDLSENNLSGPIPSTLGNLTKLANLQLYVNKFTGSIPSELSNLTNLRNLQLGDNDFVGHLPQVCLGGSLERFVAKNNHFTGPFPITLKNCSSLFRLRLDDNRLVINMTDDFGVYPNLDYIDLSGNELHGRLSSNWGKCTNLTSLRISNTNLSGKIPPELGEASKLQRLDLSSNNLIGKIPKELGKLSSLGELFLSNNKFSGKVPSEIGSLEKLTKLELAANNFSGPITKEIGRLRMLSLLNLSKNNFEQSIPSNFGQLQDLEQLDLSYNSLNGAIPAELGYLTRLMTLNLSHDNLSGYIPSSFDNMKALTFVNISYNQLEGPLPNTTAFRDITFEALRNNKGLCGNVAGLDFCNEVSNNSNGHKRKKVKLLIIFLTLATLLIIVVGISFLFYRRARKAETQDEKAQSQDLSFVWHDDREIMYENVIEATKFFDNRYLVGKGGQGSVYKAELSTGQAVAVKKLHLLPDGEITNLKAFTSEVRALTEIKHRNIVKLYGFCSNSQFSFLVYEFLEGGSLNEILKNEKQAIELDWSKRVNVVKGVANALFHMHHGCSFPIIHRDISSKNVLLNLEYEEAKLIDFGTAKFLNPNSNNMTLFAGTFGYAAPEIAYIMEANEKCDVYSFGVLTLEIMMGMHPGELIVSFTETPTTYDLTLKDLLDQRLPQPENSVVEEVMLIAKIAFACLNKNPQFRPTMEQVSMELLMPKFPLIDQFPTITLRQLMKD 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2286 1017 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Bisa09g2286 1017 SUPERFAMILY RNI-like 307 616 - -
Bisa09g2286 1017 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 236 331 - -
Bisa09g2286 1017 Gene3D Transferase(Phosphotransferase) domain 1 806 999 - -
Bisa09g2286 1017 FunFam MDIS1-interacting receptor like kinase 2 806 1000 - -
Bisa09g2286 1017 Gene3D Ribonuclease Inhibitor 28 190 IPR032675 -
Bisa09g2286 1017 SUPERFAMILY L domain-like 47 400 - -
Bisa09g2286 1017 ProSiteProfiles Protein kinase domain profile. 727 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g2286 1017 SMART LRR_typ_2 553 577 IPR003591 -
Bisa09g2286 1017 SMART LRR_typ_2 338 362 IPR003591 -
Bisa09g2286 1017 SMART LRR_typ_2 97 121 IPR003591 -
Bisa09g2286 1017 SMART LRR_typ_2 266 289 IPR003591 -
Bisa09g2286 1017 SMART LRR_typ_2 218 242 IPR003591 -
Bisa09g2286 1017 SMART LRR_typ_2 290 314 IPR003591 -
Bisa09g2286 1017 SMART LRR_typ_2 529 552 IPR003591 -
Bisa09g2286 1017 SMART LRR_typ_2 481 505 IPR003591 -
Bisa09g2286 1017 Pfam Protein kinase domain 732 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g2286 1017 Gene3D Phosphorylase Kinase; domain 1 688 805 - -
Bisa09g2286 1017 ProSitePatterns Tyrosine protein kinases specific active-site signature. 851 863 IPR008266 GO:0004672|GO:0006468
Bisa09g2286 1017 PANTHER LEUCINE RICH REPEAT KINASE 2 287 1000 - -
Bisa09g2286 1017 SUPERFAMILY Protein kinase-like (PK-like) 706 995 IPR011009 -
Bisa09g2286 1017 Gene3D Ribonuclease Inhibitor 360 649 IPR032675 -
Bisa09g2286 1017 Gene3D Ribonuclease Inhibitor 204 359 IPR032675 -
Bisa09g2286 1017 PRINTS Leucine-rich repeat signature 553 566 - -
Bisa09g2286 1017 PRINTS Leucine-rich repeat signature 293 306 - -
Bisa09g2286 1017 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 338 652 - -
Bisa09g2286 1017 FunFam Nuclear pore complex protein NUP107 28 188 - -
Bisa09g2286 1017 Pfam Leucine rich repeat 459 518 IPR001611 GO:0005515
Bisa09g2286 1017 Pfam Leucine rich repeat 532 590 IPR001611 GO:0005515
Bisa09g2286 1017 FunFam Leucine-rich repeat receptor protein kinase MSP1 690 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2286 Bisa-ChrBisa09 39621556 39624687 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2286 15 900 Receptor kinase-like Gene Family AT4G08850 41.866 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa09g2286 Pkinase 2e-44 CL0016