Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2275 ATGTCTGAAAGTGCCTCTACAAAGCTCTTAGCATTTTGGCAGTTTCTCTGCATATTCCTCGGTTTCTGTGTGAAGCTTTCTTCATCCAAATTTGCTTCTGCAGGAGCTCGTTTTGAAGCAAGTGCTCTGTTGACGTGGAAGGCCAGCCTTGACGAACAAAGCCAACAAACCTTGTCTTCATGGAAGAATGGCACTAGTCTATGCAGAAACTGGAAAGGGGTTACATGTGATGGATCCACCATCTCTGTCTCCATGATCAACCTCACAAGCCTTGGGCTACAAGATAAAGAATATGAAGAAGCTCACATCATTGACTTTGGGACAACGAAGTTTCTAAATCCTAACTCCAACAATGTGACTTCATTTGCTGGCACCTTTGGTTATGCTGCTCCAGAGGTTGCTTACATTATGGAGGCAAATGAAAAATGTGATGTTTACAGTTTTGGAGTACTGACTTTGGAAATCATAATGGGAATGCACCCTGGAGAGTTTATTTCTTCTTTAAAAGAGACGTCAACTGTACAACACTTATTTTTGAAGGATGTGCTGGACCCACGTCTTCCTTTACCAACAAAGCCAATTGTTGAGGAAGCAATATTGATTGCAAAATTAGCATTGGCTTGCTTGCATGAAAATCCACAGTCTCGTCCAACCATGGAACAAGTGTCAATGGAACTTGTGAGGCCAAAATCCGATTTAGTGGACCAGTTTGCTACCATTACAATCAGACAACTCATGAGAGATTGA 747 0.419 MSESASTKLLAFWQFLCIFLGFCVKLSSSKFASAGARFEASALLTWKASLDEQSQQTLSSWKNGTSLCRNWKGVTCDGSTISVSMINLTSLGLQDKEYEEAHIIDFGTTKFLNPNSNNVTSFAGTFGYAAPEVAYIMEANEKCDVYSFGVLTLEIIMGMHPGEFISSLKETSTVQHLFLKDVLDPRLPLPTKPIVEEAILIAKLALACLHENPQSRPTMEQVSMELVRPKSDLVDQFATITIRQLMRD 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2275 248 Gene3D Transferase(Phosphotransferase) domain 1 85 241 - -
Bisa09g2275 248 SMART serkin_6 15 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g2275 248 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g2275 248 Pfam Protein kinase domain 99 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g2275 248 PANTHER LEUCINE RICH REPEAT KINASE 2 93 231 - -
Bisa09g2275 248 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Bisa09g2275 248 SUPERFAMILY Protein kinase-like (PK-like) 95 224 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2275 Bisa-ChrBisa09 39021641 39024803 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2275 93 238 Receptor kinase-like Gene Family AT1G75820 36.250 2.85e-21 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa09g2275 Pkinase 1.4e-14 CL0016