Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2270 ATGTCGGAAAGTGTTTTCACTAAGCTTTTACCATTTTGGCTTGTTCTCTGCATATTCTTCTGTTTCTTTGTGAAGCTTTCTTCATCTTCAGAAGCAACTTCTCTGCTGAAGTGGAAGGCCAGCCTTGACGAACAGAGCCAAAAAAGCTTGTCTTCATGGAAGAATGGCACTAGTCCCTGCAGAAACTGGAAAGGGGTTACATGTGATGGATCCACCATGTCTATCTCCATGATCAACCTCACAAGCCTTGGGCTACAAGGTACACTCGACAATCTCACCTTCTCATCCTTCCCTAACCTCACCTCTTTTGATATCAGTAACAATTCGTTTTATGGTAACATTCCCCCTCAAATTGGTGATTTGTCCAGTATTTTGACGTTGAATATGGCTGGTAATCCCTTAAGTGGTCCAATACCTCGTGAAATAGGGGCTTTGAGAACTCTAAAGCAACTTTCCATTTTTGAATGTAATCTCATGGGCTCCATTCCAAATGAAATTGGGAATCTGACCAGTCTTGTAGATCTACAACTTCAATTTAATAGCCTTTCTGGGTCAATTCCTCAAGAAATCGGAATGCTGAGGGTGGCTAATGCTTTGCTCCATATGCACCATGGATGTTCATTTCCTATAGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAAATTTGGAATATCAAGCTAAACTCATTGATTTTGGAACAGCCAAGTTTCTAAACCCAAACTCAAACAACATGACCTCATTTGCCGGAACTTTTGGATATGCCGCTCCAGAGATCGCTTACATTATGAAGGTGAATGAGAAATGTGATGTTTATAGTTTTGGGGTATTGACATTGGAAATCATTATGGGGGAACATCCAGGAGAGTTTATTTCTTCATTGTCAGGGACATCAACAGCCTATAATTTGCTATTGAAGGATGTTTTAGATCATCGACTTCCTTATCCCACAAAACCAGTTGTTGAGGGGGTGATTTCAATTGCAAAAATAGCGTTTGCTTGCTTGAGTGAGAATCCACGAACTCGTCCAACCATGGAACAAGTATCTAATGAGCTTTTGATGCCAAAATCACATCTAATTTATGACTTCCACACTCTCACACTTGGACAACTCATGAAACTTTGA 1128 0.4025 MSESVFTKLLPFWLVLCIFFCFFVKLSSSSEATSLLKWKASLDEQSQKSLSSWKNGTSPCRNWKGVTCDGSTMSISMINLTSLGLQGTLDNLTFSSFPNLTSFDISNNSFYGNIPPQIGDLSSILTLNMAGNPLSGPIPREIGALRTLKQLSIFECNLMGSIPNEIGNLTSLVDLQLQFNSLSGSIPQEIGMLRVANALLHMHHGCSFPIVHRDISSKNVLLNLEYQAKLIDFGTAKFLNPNSNNMTSFAGTFGYAAPEIAYIMKVNEKCDVYSFGVLTLEIIMGEHPGEFISSLSGTSTAYNLLLKDVLDHRLPYPTKPVVEGVISIAKIAFACLSENPRTRPTMEQVSNELLMPKSHLIYDFHTLTLGQLMKL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2270 375 SUPERFAMILY Protein kinase-like (PK-like) 192 353 IPR011009 -
Bisa09g2270 375 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Bisa09g2270 375 Gene3D Ribonuclease Inhibitor 29 195 IPR032675 -
Bisa09g2270 375 ProSitePatterns Tyrosine protein kinases specific active-site signature. 210 222 IPR008266 GO:0004672|GO:0006468
Bisa09g2270 375 PANTHER LEUCINE RICH REPEAT KINASE 2 71 192 - -
Bisa09g2270 375 Pfam Protein kinase domain 192 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g2270 375 FunFam Nuclear pore complex protein NUP107 28 188 - -
Bisa09g2270 375 Gene3D Transferase(Phosphotransferase) domain 1 196 364 - -
Bisa09g2270 375 ProSiteProfiles Protein kinase domain profile. 20 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g2270 375 SUPERFAMILY L domain-like 29 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2270 Bisa-ChrBisa09 38835756 38868620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2270 195 258 Receptor kinase-like Gene Family AT4G08850 60.938 4.18e-18 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa09g2270 Pkinase 3.6e-24 CL0016