Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2229 ATGGAGGTGGGTGCTAATAAGGTAATGAATAATAAGAGGTCAGAGAAGAATGAAGAAGACGAAGAAGGCACTGTGCTTCCAGGGTTTAGATTTCATCCCACAGACGAAGAGCTTGTTGGCTTCTATCTGCGACGAAAGGTTGAGAAGAAGCCTCTTCGAATCCAACTCATCAAGAACATCGATATCTACAAATACGATCCTTGGGATCTTCCAAAAGAAGGTGGAAGCAATGTGGGGGAGAAGGAGAAGGAGAAGGAGTGGTACTTCTTCTGCAAGAGAGGGAGAAAGTACAGAAACAGCGTGAGGCCTAACAGGGTGACAGGGTCAGGTTTCTGGAAGGCCACAGGGATCGACAAGCCCATCCACGCTCTCTCTGAGCCTCACCACTGCATTGGCCTCAAGAAGTCGCTAGTCTATTATCGTGGCTCTGCCGGCAAAGGCTCCAAAACTGACTGGATGATGCATGAGTTTCGCCTTCCTCCTACACCTCCTTCCACTTCCAATACTAAGCCTGATAATCTTCAAGAAGCTTTAGCTCATCATCAAGCTGCTCCAACAATGGTGACTAACTGTTATAACCCTACCCTTTCGAGTCATCAGAGTATGGAGGATGTTTTTACCATTGGAGATCACTGGGATGAGCTCAGATCTGTGGTTCAGTTTGCTGATATTGATCCTTCCACTGTATATGATTGTACAGGATTAGATAGGTTAGAAAAATTTTGA 726 0.4573 MEVGANKVMNNKRSEKNEEDEEGTVLPGFRFHPTDEELVGFYLRRKVEKKPLRIQLIKNIDIYKYDPWDLPKEGGSNVGEKEKEKEWYFFCKRGRKYRNSVRPNRVTGSGFWKATGIDKPIHALSEPHHCIGLKKSLVYYRGSAGKGSKTDWMMHEFRLPPTPPSTSNTKPDNLQEALAHHQAAPTMVTNCYNPTLSSHQSMEDVFTIGDHWDELRSVVQFADIDPSTVYDCTGLDRLEKF 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2229 241 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 167 - -
Bisa09g2229 241 Gene3D NAC domain 34 184 IPR036093 GO:0003677|GO:0006355
Bisa09g2229 241 ProSiteProfiles NAC domain profile. 25 182 IPR003441 GO:0003677|GO:0006355
Bisa09g2229 241 MobiDBLite consensus disorder prediction 1 29 - -
Bisa09g2229 241 MobiDBLite consensus disorder prediction 9 26 - -
Bisa09g2229 241 Pfam No apical meristem (NAM) protein 27 159 IPR003441 GO:0003677|GO:0006355
Bisa09g2229 241 SUPERFAMILY NAC domain 25 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2229 Bisa-ChrBisa09 36696911 36702331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2229 8 172 NAC Transcription Factor Family AT5G39820 63.030 8.99e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa09g2229 NAM 7.1e-37 No_clan