Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2213 ATGGCGAATCATGAGAATAAGGACCATTATGATCAGTTTGATCCGTTCTATTACAACCACCAAAACCTTCTTCAAGGGTTTGATCATCATCCCTCACAGTACAACACAAGCTTCACTGATTGCCTGAATGGTGGTTTCATGGACTACAACAGTCTCTCGAGAGCCTTTGACTTGTCTTGCTCATCAGCAGCAGCATCTGAAGTGATCTCATCCTCCATTGACGAAAACCCAAAGAAGCCCACTAGTTCTGCCACTGTGGGTCCCAATTCCTCGTTGTCTAATTCATCTTCCAATGAGGCTGAAGAAGAAGCAGTACTGGAAGAAACAGAAGAGGACTCGGCCAAAAGCAGGAAGAAGAAAGAGATAGACCAAGATCAAGGAGACGAAAAGGCCAAGAAAGAGAGCAAGCCAAAAGGTAGTAAGAAGGAGAAAAAGCCAAGAGAGCCACGTTTTTCTTTCTTGACTAAAAGCGAGGTTGATCACTTAGAAGATGGATACAGGTGGAGAAAATATGGGCAGAAAGCAGTCAAGAATAGTCCTTACCCAAGGAGCTATTACAGATGCACAAGTCAGAAGTGCACAGTGAAGAAAAGAGTGGAGAGGTCATTCCAAGACCCATCAATTGTGGTCACAACATATGAAGGGCAGCACAACCACCATTGTCCGGTGACGCTCCGGGGAAATGCCGGCGCTGCCATGATGTTATCAGCGTCGGCCCCATCGCCTGCTTCCCTTTTTGGATCGGCTTCTATGGGGAGGACAAGCTTGTTGCCCCCAGAACTCTTGGCTCAGTTGCTTCCAAGTTATAGCCAAGCTGATCACCAAAACCATCCCGATCCCAACATGTTCCACCAAAACCCTAATTCCCAAGATCATCATCTTCACCAGCAGCATCAACACCAGCTCACAACTCATGACTATGGCTTGTTACAAGACCTACTACCTTCATCCTCATCATTCCATGGAAGACAACAGCCATGA 981 0.4648 MANHENKDHYDQFDPFYYNHQNLLQGFDHHPSQYNTSFTDCLNGGFMDYNSLSRAFDLSCSSAAASEVISSSIDENPKKPTSSATVGPNSSLSNSSSNEAEEEAVLEETEEDSAKSRKKKEIDQDQGDEKAKKESKPKGSKKEKKPREPRFSFLTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCTVKKRVERSFQDPSIVVTTYEGQHNHHCPVTLRGNAGAAMMLSASAPSPASLFGSASMGRTSLLPPELLAQLLPSYSQADHQNHPDPNMFHQNPNSQDHHLHQQHQHQLTTHDYGLLQDLLPSSSSFHGRQQP 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2213 326 Gene3D WRKY domain 148 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa09g2213 326 FunFam WRKY transcription factor 57 148 222 - -
Bisa09g2213 326 MobiDBLite consensus disorder prediction 73 156 - -
Bisa09g2213 326 MobiDBLite consensus disorder prediction 271 303 - -
Bisa09g2213 326 SMART WRKY_cls 162 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g2213 326 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 65 285 IPR044810 GO:0003700
Bisa09g2213 326 ProSiteProfiles WRKY domain profile. 157 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g2213 326 Pfam WRKY DNA -binding domain 163 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g2213 326 SUPERFAMILY WRKY DNA-binding domain 155 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa09g2213 326 MobiDBLite consensus disorder prediction 110 156 - -
Bisa09g2213 326 MobiDBLite consensus disorder prediction 271 290 - -
Bisa09g2213 326 MobiDBLite consensus disorder prediction 73 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2213 Bisa-ChrBisa09 36174389 36176595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2213 26 316 WRKY Transcription Factor Family AT4G18170 46.358 1.41e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa09g2213 WRKY 1.5e-25 CL0274