Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2208 ATGCGGAAGATCGGACAGCAGAATCTGCATGAGAAATTGAGAGCAGGGACATTAGCTTCGGCAGCTTGCGTTATTGCAATGAGAAGCCCAGAATCTCAATCGGTGCTTTTCAGAACAGATACAGAGTCTTGCCGTGTTGCAACACGTTCCGTGCCTCGACTTCAAGAGCTAGTGATTGTCGGGTATTCCCGAATTTCCAGAAACCTCGCTTCGCCCAAAATCTTTGTCCCCGTCCTAGTTCCTCTACTTGAGTGCGATATGAAAGCTATGAATGACAATTATTCAGCCCCCGTAAGCAACGAAATGAAGAACCAAGACAAGAAAATCCTTTCTTCCAGGGATAGGATTCCAGGAGGAGAACTTTGGAATGATGGACTCATTTGCGCTTTTGAATTTATCCCCGGATCTCGGAGAACAAAGTCAACAGAAGCAGTTAAAGATGTGACAAAAAAGAAGGTCTTCCAAGGCGATCAAAATAACTCCTTAAGAAGAAACAATACTAAAAACTGCTCTACTGAATCTTCCTTAGCAGTTGAATCTGGAGTTGGCGATCTTGATGCTGTAGATGGCCATCATCATGGTAAGGATTATCAACCACAACATCTCTTTGGTAGAGAAGGTCATCCAAGAAGTTACTGGAGACCAATTGGTTGGGCAAGAATTTCCGAACTTGTCCGGACAGTGCACGTTGAAACTGACTGGGCTTCACAGTCACATAGTTTCTCAGATGATGAAAGTGATGTTACTGTCGCAGATGTAGCAACTCCTTACTGGGAACGGCCAGTTGGTCCGACATGCATTGCTTTGCAAGATGAAAGTAAACTAATCAGTGAGCGAATGAAATACCTTTTATATGAGGTGCCTGTTCGAGTTGCTGGTGGACTACTATTTGAACTTCTGGGGCAGTCAGCTGGGGATCCTTTTATTGAGGAAGATGACATACCAGTTGTTTTACGAGCATGGCAAGCACAAAACTTTTTGGAAGTGCTTGCTGCTGGAGGGACTAATATACCACACTGCATTCATGAGGTTGTAGCACACCTAGCAAGTTGTCTTGCTCGATGGGATGTGTTGGGCCCTCGGTTGTTCCGTAAATACATATTTGGGGCTGCAGATGAAATTGAATTGATGTTTATGAACAGGAGGAACCATGAGGACTTGCATCTTTTCAGTATAATATTGAACCAAGAAATTAGAAGATTATCAACCCAGGTTATAAGAGTGAAACGGTCACTCCATGCGCGAGAGGAAATTGTTTTTGAACTTATTCAACAACTGAGAGGAAGTGAGACAAGCTTCTTGTTAGAAGGAGTAAGAAAGAGTACTGGAGCAATGATAGAGGAGCAAGAAGCAGTTCGTGCTCGCTTATTCACAATCCAAGTTGTCATGCAAAGCATAGTTCGTTCATGGTTGCAGGACAAAAGCCTCACGGTCACCCATAATTTAGGAGTGTTTGGGGGTGGTGGCCTTATTCTCTCCGTCATCACTGGCCTATTTGGTATTAATGTGGATGGAATACCTGGAGCTACTGACACTCCATATGCATTTGCTCTCTTCTCTGCCCTCCTCTTTTTGTTAGGAGCTGCACTAATTGGAATTGGATTGCTTTATCTTCATCCATTGTTCAGCTTCAATGATGATTCTTCTAGATACAACCCCACTTCTAGACTGAACCCAAAATGCAGATTCATCATGGATGAACCCCTTCTCTCCAGAAAATTTGGACGGATAGCAGAATCATCTAGCAGGCCATCAACCACCATAGAGATTTCTCCATCTTATATTGATCTCATCACCAATGAAGAAATCATTCAGATCATTACCACTCCCAAGAACAGCTCTTCTTATTTGAACCTCATAGCAAACTTGAACAGGAGAAGGAAGATCGTCCATCGGTCACACTCTGCTCCATCACTTTTCACTGATATCAAAGAAGATTGTCGCGACCCCTTTGACCCCAGAACTGCACAGAACTCATCACCTTTGATAGTGAGGCTATCCTTCGTTGGGGTTATCTTGTACATAGCAATAGGAGTTATAGTTTACTTGATAAGTGGGAATTTCAAAGGCAAATCCACATTCAAGCCTGTGGATGCTGTCTACTTTACAATGGTCACTCTCTGCACCATTGGGTATGGCGACATTGTTCCCGATACAGCATTCACCAAAATCTTCACTTGTGGTTTCATTCTTGTGGGTTTTGGATTCATCGGTATTCTGCTAAACGGGTTGGTCACCTACATATGTGATAGACAAGAGGCGATGTTATTGAGTGCCATGGATGAGAATCGATTTAACACAATGGTTAGAACCTATATGATTGATAAAGAAAAGGGGAGAATGAGGATACGAACCAAAGTGTGTCTAGCTTTGGCAGTTGTCATTGGTTGCATTGCCTTGGGAACAATTTCAGCCCACTTTCTTGAGAATATGGATTGGGTGGACAGTTTTTATCTCTCTGTAACTTCTGTTACAACAGTGGGTTATGGGGATTATGCTTTCTCAACAGTGATCGGAAGGTGCTTTGCAATAATATGGTTGTTGGTGAGCACATTGGCAGTTGGCAGGGCCTTTCTGTACCTTACTGAATATAGTATTGACAAGAGAAATCGTAATATTACAAAATGGATTCTTCATAAGAAAATTACTTTGTCCGATTTAGTAGCTGCAGACCTTGACAATGATGGATCTATCAGCAAGTCTGAATTTGTCATATACAAGCTTAAGCAGATGGGGAAGATAACTGAAATCGATATTCAGCAAATAAGCAAACAATTTGATTCGATGGACAGTAGTAATTATGGCAAGATTACCCTTGCTGACCTCATGGAGCCTGTTTAA 2841 0.4234 MRKIGQQNLHEKLRAGTLASAACVIAMRSPESQSVLFRTDTESCRVATRSVPRLQELVIVGYSRISRNLASPKIFVPVLVPLLECDMKAMNDNYSAPVSNEMKNQDKKILSSRDRIPGGELWNDGLICAFEFIPGSRRTKSTEAVKDVTKKKVFQGDQNNSLRRNNTKNCSTESSLAVESGVGDLDAVDGHHHGKDYQPQHLFGREGHPRSYWRPIGWARISELVRTVHVETDWASQSHSFSDDESDVTVADVATPYWERPVGPTCIALQDESKLISERMKYLLYEVPVRVAGGLLFELLGQSAGDPFIEEDDIPVVLRAWQAQNFLEVLAAGGTNIPHCIHEVVAHLASCLARWDVLGPRLFRKYIFGAADEIELMFMNRRNHEDLHLFSIILNQEIRRLSTQVIRVKRSLHAREEIVFELIQQLRGSETSFLLEGVRKSTGAMIEEQEAVRARLFTIQVVMQSIVRSWLQDKSLTVTHNLGVFGGGGLILSVITGLFGINVDGIPGATDTPYAFALFSALLFLLGAALIGIGLLYLHPLFSFNDDSSRYNPTSRLNPKCRFIMDEPLLSRKFGRIAESSSRPSTTIEISPSYIDLITNEEIIQIITTPKNSSSYLNLIANLNRRRKIVHRSHSAPSLFTDIKEDCRDPFDPRTAQNSSPLIVRLSFVGVILYIAIGVIVYLISGNFKGKSTFKPVDAVYFTMVTLCTIGYGDIVPDTAFTKIFTCGFILVGFGFIGILLNGLVTYICDRQEAMLLSAMDENRFNTMVRTYMIDKEKGRMRIRTKVCLALAVVIGCIALGTISAHFLENMDWVDSFYLSVTSVTTVGYGDYAFSTVIGRCFAIIWLLVSTLAVGRAFLYLTEYSIDKRNRNITKWILHKKITLSDLVAADLDNDGSISKSEFVIYKLKQMGKITEIDIQQISKQFDSMDSSNYGKITLADLMEPV 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2208 946 PRINTS Two pore domain K+ channel signature 825 834 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bisa09g2208 946 PRINTS Two pore domain K+ channel signature 705 733 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bisa09g2208 946 FunFam Two-pore potassium channel 3 770 884 - -
Bisa09g2208 946 PANTHER MAGNESIUM TRANSPORTER CORA-LIKE FAMILY PROTEIN 328 538 - -
Bisa09g2208 946 SUPERFAMILY EF-hand 889 943 IPR011992 -
Bisa09g2208 946 SUPERFAMILY Voltage-gated potassium channels 659 748 - -
Bisa09g2208 946 Gene3D - 887 946 - -
Bisa09g2208 946 SUPERFAMILY Voltage-gated potassium channels 774 881 - -
Bisa09g2208 946 Gene3D - 754 886 - -
Bisa09g2208 946 ProSitePatterns EF-hand calcium-binding domain. 891 903 IPR018247 -
Bisa09g2208 946 Pfam Ion channel 794 862 IPR013099 -
Bisa09g2208 946 Pfam Ion channel 671 748 IPR013099 -
Bisa09g2208 946 Gene3D Magnesium transport protein CorA, transmembrane region 487 539 - -
Bisa09g2208 946 FunFam Two-pore potassium channel 2-like 662 758 - -
Bisa09g2208 946 Gene3D - 653 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2208 Bisa-ChrBisa09 36051605 36063042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2208 630 944 Ion Channels AT4G18160 51.266 1.45e-101 322