Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2205 ATGGATATGGAGCAAGAGCAAGAGCAAGAGAAGGGGAAGAACCAGAATAGGCCAAGCATTGATATCCCAAAGGCTGTTTCTCCAGTTTCTTTTGCTGCAGAGGAAGAAACTGTCAGGCGGCCTCGGGGGCGGCCCGCCGGCTCCAAGAACAAGCCAAAGCCACCCATTATTGTCACTAGAGATAGTGCTAATGCTCTGAGGGCTCATGCACTGGAGGTGAGTTCTGGGTGTGATATAAATGACAGTTTGCTCAACTTTGCAAGAAGGAAGCAGCGTGGGATTTGCATACTCAGTGGGACTGGCTGTGTGACAAATGTGACACTGCGCCAACCGGCCTCCTCCGGTGCCACGGTGACCCTCCATGGCCGGTTCGAGATTCTCTCTCTGCTGGGATCAATCCTGCCTCCGCCGGCACCACCCGGGATCACAGGTCTGACCATTTACCTAGCCGGGGCTCAAGGTCAGGTTGTGGGAGGTGCTGTAGTGGGTGCTCTGGTGGCCTCAGGCCCTGTTGTCATCATGGCTGCATCATTCATGAATGCTACTTTTGATCGCTTGCCATTGGAGGATGATGAGATAGCTCAGAACCAGCATTTACAAAATGGTCGAGGTCATCATCTTCATCATCATCATCATCTTGATGTCTCAGATTTATATGGAATGCCACAGAACTTGCTCACCAATGGTACAATGCCCCCTGAGATGTACTCTTGGACTCCTGGCCGCAACTTCTCAAAAGCCTGA 744 0.5188 MDMEQEQEQEKGKNQNRPSIDIPKAVSPVSFAAEEETVRRPRGRPAGSKNKPKPPIIVTRDSANALRAHALEVSSGCDINDSLLNFARRKQRGICILSGTGCVTNVTLRQPASSGATVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALVASGPVVIMAASFMNATFDRLPLEDDEIAQNQHLQNGRGHHLHHHHHLDVSDLYGMPQNLLTNGTMPPEMYSWTPGRNFSKA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2205 247 CDD DUF296 67 149 IPR005175 -
Bisa09g2205 247 PIRSF ESCAROLA 1 244 IPR014476 GO:0003680
Bisa09g2205 247 ProSiteProfiles PPC domain profile profile. 63 201 IPR005175 -
Bisa09g2205 247 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 9 204 IPR014476 GO:0003680
Bisa09g2205 247 MobiDBLite consensus disorder prediction 1 17 - -
Bisa09g2205 247 SUPERFAMILY AF0104/ALDC/Ptd012-like 63 195 - -
Bisa09g2205 247 Pfam Plants and Prokaryotes Conserved (PCC) domain 67 179 IPR005175 -
Bisa09g2205 247 MobiDBLite consensus disorder prediction 1 57 - -
Bisa09g2205 247 FunFam AT-hook motif nuclear-localized protein 66 193 - -
Bisa09g2205 247 Gene3D - 65 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2205 Bisa-ChrBisa09 36020659 36021402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2205 3 242 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 67.901 6.05e-101 292