Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2175 ATGACGGTGACATCACAATTTCTGCCCAACATGGAAACTGAAAATTCTAATGTTACAAAAGCTGAAGAATTCAAACTCCAGGCCAATGAAGCATTCAATGCTCGCAAATATGCCCAAGCTATTGTCCTATATACGCAGGCAATTGAACTAAATAGTCGAAATGCTGTATACTGGGCTAATCGTGCCTTTGCCCATATTCGCCTTGAGGAATATGGTAGTGCAATACAAGATGCTACAAAGGCTATTGAAGTTGATCCCAAATATTCAAAGGGTTATTACAGGCGGGGAGCTGCTCATCTTGCCATGGGGAAATTCAAGGAAGCTTTGAAGGATTTTCAACAGGTCAAGAAAATGTGTCCTAACGATCCTGATGCAACAAAGAAATTGAAAGAATGTGAAAAAGCAGTTATGAAACTCAAATTTGAAGAAGCCATTTCTGCACCAGAGTCTGAAAGGCGTTCAATAGCAGAATCCATAGATTTTCGCTCTATAGGAAAGGGCCGCAATTCTTCGGTGCCAACCGAAGTGGCCATAGCAGGAGTCACTGTAGCAGTTATGGCAGCAGTTGTGATGTTGTTCCGGACATCAGTGACCACAATAGTGGCTGCAATTGTGGTGGGTTTGCTGTTGCTCCTTGGGGCTTATTGGAGGAGTGGCTGCAATACTGGTATATGTAGGAGTCATTTACATGACCTAGATGTGGAGCCACAATATTCAGGAGCTAGAATAGAGGGGGAGGTTGTTACTTTGGATTTTGTAAAGAAAATGATGGATGATTTCAAAAATCAGAAGAGCTTGCATAAAAGGTATGCATTCCAGATTGTTTTGCAAATGAGAGAGATGTTGCGAGTCTTGCCTTCTCTTGTTGATATAACTGTTCCTGATGGAAAGCATTTCACTGTTTGTGGTGATGTGCATGGTCAGTACTATGATCTCTTAAATATTTTTGAGCTTAACGGGCTTCCTTCAGAAGAGAATCCATACCTGTTTAATGGTGACTTTGTTGATAGGGGATCTTTTTCCTTGGAAGTCATCCTCACTTTATTTGCATTTAAATGCATGTCTCCATCAGCCATATATCTAGCTAGAGGAAATCATGAGAGCAAGAGCATGAACAAGATATATGGATTTGAGGGTGAGGTGCGCTCAAAGTTGAGCGACACATTTGTGGAACTATTTGCGGAAGTATTCTGCTGTTTGCCTTTGGCACATGTGATAAACAAGAAGGTTTTCGTAGTTCATGGAGGTCTTTTTAGTGTTGATGGGGTCAAACTATCTGACATTAGAGCAATTAATCGTTTTTGTGAGCCTCCAGAAGAAGGATTGATGTGTGAATTGCTATGGAGTGATCCACAACCTCTCTCTGGAAGAGGGCCAAGTAAACGTGGTGTAGGTCTTTCTTTTGGAGCAGATGTGACAAAAAGGTTTTTGCAGGATAATAATTTAGATTTAGTTGTGCGATCTCATGAAGTAAAAGATGAGGGTTATGAGATTGAACACGATGGTAATCTCATAACTGTCTTTTCTGCTCCAAATTACTGTGATCAGATGGGTAACAAAGGAGCCTTTATTCAATTTGAAGCGCCCAATTTGAAGCCTAACATTTTTACATTCTCTGCAGTGCCACACCCTGATGTCAAACCGATGGCATATGCGAACAATTTCCTTCGGTTATTTTCGTAA 1683 0.4088 MTVTSQFLPNMETENSNVTKAEEFKLQANEAFNARKYAQAIVLYTQAIELNSRNAVYWANRAFAHIRLEEYGSAIQDATKAIEVDPKYSKGYYRRGAAHLAMGKFKEALKDFQQVKKMCPNDPDATKKLKECEKAVMKLKFEEAISAPESERRSIAESIDFRSIGKGRNSSVPTEVAIAGVTVAVMAAVVMLFRTSVTTIVAAIVVGLLLLLGAYWRSGCNTGICRSHLHDLDVEPQYSGARIEGEVVTLDFVKKMMDDFKNQKSLHKRYAFQIVLQMREMLRVLPSLVDITVPDGKHFTVCGDVHGQYYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSLEVILTLFAFKCMSPSAIYLARGNHESKSMNKIYGFEGEVRSKLSDTFVELFAEVFCCLPLAHVINKKVFVVHGGLFSVDGVKLSDIRAINRFCEPPEEGLMCELLWSDPQPLSGRGPSKRGVGLSFGADVTKRFLQDNNLDLVVRSHEVKDEGYEIEHDGNLITVFSAPNYCDQMGNKGAFIQFEAPNLKPNIFTFSAVPHPDVKPMAYANNFLRLFS 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2175 560 SMART pp2a_7 266 542 IPR006186 GO:0016787
Bisa09g2175 560 ProSiteProfiles TPR repeat profile. 55 88 IPR019734 GO:0005515
Bisa09g2175 560 Pfam Tetratricopeptide repeat 27 88 - -
Bisa09g2175 560 SUPERFAMILY Metallo-dependent phosphatases 249 554 IPR029052 -
Bisa09g2175 560 Gene3D - 222 559 IPR029052 -
Bisa09g2175 560 FunFam Serine/threonine-protein phosphatase 5 221 559 - -
Bisa09g2175 560 Gene3D Tetratricopeptide repeat domain 11 168 IPR011990 GO:0005515
Bisa09g2175 560 Pfam PPP5 TPR repeat region 228 290 IPR013235 -
Bisa09g2175 560 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 53 553 - -
Bisa09g2175 560 CDD MPP_PP5_C 238 553 IPR041753 -
Bisa09g2175 560 PIRSF PPPtase_5 8 560 - -
Bisa09g2175 560 Pfam Calcineurin-like phosphoesterase 298 492 IPR004843 GO:0016787
Bisa09g2175 560 Pfam Tetratricopeptide repeat 90 122 IPR001440 GO:0005515
Bisa09g2175 560 FunFam Serine/threonine-protein phosphatase 5 11 148 - -
Bisa09g2175 560 SUPERFAMILY TPR-like 18 147 IPR011990 GO:0005515
Bisa09g2175 560 PRINTS Serine/threonine phosphatase family signature 361 385 IPR006186 GO:0016787
Bisa09g2175 560 PRINTS Serine/threonine phosphatase family signature 503 519 IPR006186 GO:0016787
Bisa09g2175 560 PRINTS Serine/threonine phosphatase family signature 425 452 IPR006186 GO:0016787
Bisa09g2175 560 PRINTS Serine/threonine phosphatase family signature 328 355 IPR006186 GO:0016787
Bisa09g2175 560 PRINTS Serine/threonine phosphatase family signature 481 501 IPR006186 GO:0016787
Bisa09g2175 560 PRINTS Serine/threonine phosphatase family signature 395 421 IPR006186 GO:0016787
Bisa09g2175 560 PRINTS Serine/threonine phosphatase family signature 298 325 IPR006186 GO:0016787
Bisa09g2175 560 SMART tpr_5 89 122 IPR019734 GO:0005515
Bisa09g2175 560 SMART tpr_5 21 54 IPR019734 GO:0005515
Bisa09g2175 560 SMART tpr_5 55 88 IPR019734 GO:0005515
Bisa09g2175 560 ProSiteProfiles TPR repeat profile. 89 122 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2175 Bisa-ChrBisa09 35062952 35091150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2175 301 482 Calmodulin-binding Proteins AT5G63870 36.574 3.87e-37 137