Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2151 ATGGAGAAGACAGTAGCAACGCTATCAGTGAAGGACGAATTCGAGAAGCTAGAGAAGGTTGGAGAAGGGACTTATGGTAAGGTTTATAGGGCAAGAGAGAGAGCAAGTGGTAAGATCGTTGCCCTCAAGAAGACTCGTCTCCACGAGGACGAAGAAGGCGTCCCTCCCACCACTCTCCGTGAGGTTTCCATTTTACGCATGCTATCTCGGGATCCCCATGTCGTCAGGTTGATGGATGTAAAGCAAGGTCAGAACAAGGAAGGAAAGACAGTGCTCTACTTGGTATTTGAATTCATGGATACCGATCTCAAGAAATTTATTCGGAGTCACCGTCATGCCGCCGGAGAAAACATCCCTGCCAAAACTATCAAAAGCTTGATGTACCAACTTTGTAAGGGCGTTGCTTTCTGCCACGGTCATGGAATCTTGCACAGAGATTTGAAGCCTCATAACCTCTTGATGGACCGAAAAACGATGATGCTTAAAATAGCAGATCTTGGACTAGCTCGGGCATACACTGTGCCAATTAAGAAATATACTCATGAGATACTAACCCTGTGGTATAGAGCTCCTGAGGTCCTTTTAGGAGCCACCCATTACTCAATGGCAGTAGATATGTGGTCTGTTGGCTGCATATTTGCTGAACTTGTTACAAGGCAAGCACTCTTTCCTGGTGATTCCGAGCTGCAACAACTGCTGCATATATTCAGGCAACTTGGTACTCCTAATGAAGAGGTGTGGCCAGGCGTTAGTAAACTAATGAATTGGCATGAGTACCCCCAGTGGAGTCCTCAAAGTCTATCTAAAGCAGTTCCTAACTTGGATGAGCTTGGACTGGATCTGCTATCTCAAATGTTGCAGTATGAGCCTTCAAAGCGGATTTCTGCAAAGAAGGCCATGGAACACCCTTACTTCGATGACTTGAACAAGACAACCGTTAAAAAACAGCGCACCGAATTGCTTTGCGAAGTTCAGATTTCACAAGTAGTTTCTGTGCTTCAACAAAAGTAA 1011 0.453 MEKTVATLSVKDEFEKLEKVGEGTYGKVYRARERASGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEFMDTDLKKFIRSHRHAAGENIPAKTIKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAYTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDMWSVGCIFAELVTRQALFPGDSELQQLLHIFRQLGTPNEEVWPGVSKLMNWHEYPQWSPQSLSKAVPNLDELGLDLLSQMLQYEPSKRISAKKAMEHPYFDDLNKTTVKKQRTELLCEVQISQVVSVLQQK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2151 336 ProSiteProfiles Protein kinase domain profile. 14 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g2151 336 FunFam Cyclin-dependent kinase 2 102 312 - -
Bisa09g2151 336 FunFam Cyclin-dependent kinase B2,2 10 100 - -
Bisa09g2151 336 PANTHER CELL DIVISION PROTEIN KINASE 12 306 - -
Bisa09g2151 336 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Bisa09g2151 336 SUPERFAMILY Protein kinase-like (PK-like) 9 309 IPR011009 -
Bisa09g2151 336 SMART serkin_6 14 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g2151 336 Pfam Protein kinase domain 14 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g2151 336 Gene3D Transferase(Phosphotransferase) domain 1 102 334 - -
Bisa09g2151 336 Gene3D Phosphorylase Kinase; domain 1 9 100 - -
Bisa09g2151 336 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2151 Bisa-ChrBisa09 34595691 34598963 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2151 1 308 Core Cell Cycle Gene Families AT1G76540 83.766 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Bisa09g2151 Pkinase 1.8e-70 CL0016