Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2119 ATGGAGACGAAGTTGTTTCGGGTTGTTTCTTGGGTGCTCCTGCTTGTCATGGTGCCTCCATTTGTGGTCGGCGATAATGTGAATATCTCAAGACCCGCTCAAGTGCATATTGGAGCTATCTTCACCTTTGATTCTACCATTGGCAAAGTCGCTAAAATTGCGATGCAGGAGGCGGTGAAGGATGTAAACGCCAATCGTAGCGTCCTCCCTGGAACTAAACTTGTCCTCACTATGCAAAGTTCCAATTGCAGTGGTTTCGTCGGCATGGTTCAAGCTTTGCGGTTCATGGCGACTGATGTCGTCGCAATAATAGGTCCACAATCTTCTGTAGTTGCTCACATAATATCCCATGTGGCAAATGAGCTTCAAGTCCCTCTATTGTCATTTGCGGCAACAGACCCTACCCTATCTTCCCTGCAGTTCCCATTTTTTGTGAGGACAACCCAGAGTGATTTGCAACAAATGACTGCAGTTGCTGAAATTGTTGAGTATTATGGTTGGAAGGAGGTTATTACTATATTTGTAGATGACGATTATGGACGAAATGGCGTGTCATCTTTAGAAGATAGTCTAGCATCCAGGCGCTGTAGAATCTCCTACAAGGGAGGAATTAAGTCAGGACCAGGAGTTGATCGGTCAGAAATCACGGATTTGCTGGTGAAGGTGGCTCTAATGCAATCTCGGGTTATTGTTCTCCATGTAAATCCTGATTCAGGGTTTACGGTTTTCAATGTGGCCCAATATCTTGGGATGACAGGGAATGGCTATGTCTGGATAGCCACAGACTGGCTTTCCTCTGTTCTGGATTCTGCCTCTCTCCCTGCAAACACCATGAATGTTCTGCAGGGTGTTATTGTTTTACGCCAACATACTCCTGATTCGGATAGAAAAAGAACATTTCTATCTAGGTGGAGCAAATTGACTGGTGGCTCTATGGGGTTACACTCTTATGGCCTCTATGCATATGATTCTGTCTGGATGCTTGCACAAGCTATTGATGCATTCTTCAATCAGGGTGGGGTCATATCATTTTCTAATGACTCCAGGATACATGATGTTCAGGGAGGTAATCTTAACCTTGAAGCAATGAGCATTTTTGACAATGGAACGCTTCTGTTGAAAAAAATATTGCAGAGCAACTTTGTTGGGTTATCAGGTCTTATGAAATTTGACTCAGACAAATCCCTTGTTCGTCCTGCATATGATATTATTAATGTGGTGGGAACTGGGATTCATCAGGTTGGTTACTGGTCCAACTATTCTGGTCTTTCCGTTGTGCCCCCTGAGACATTGTATGCGAAGCCTCCTAATCGCTCAAGTGCAAGTCAACAACTTCACAGTGTAATATGGCCAGGAGAAACATTATCAAAACCCCGTGGATGGGTTTTCCCGAATAATGGAAAACAATTGAGAATTGGTGTACCTCTCCGAGTCAGTTACCGTGAATTTGTATCGCCAGTGCAAGGAACTGATCTGTTTAAAGGTTTCTGTATTGATGTATTCACAGCAGCTGTAAACTTGTTGCCATATGCTGTTCCATATCGCTTTGTCCCATTTGGAGATGGTCACGAAAACCCAAGTTACACTGACCTTGTCCACTTGATAACCACAGGCTACTTTGACGGTGTTGTTGGTGACATTGCCATTGTCACCAACCGGACAAAGACTGTAGATTTTACACAACCATATGCTGCATCTGGACTTGTGGTGGTGGCTCCTTTTAAGAAAATAAACTCTGGTGGTTGGTCTTTCCTGCGGCCATTCACTCCTCTAATGTGGATTGTCACTACTTGTTTCTTCTTTTTCATTGGGATAGTTGTGTGGATTCTGGAGCATCGGATAAATGATGAGTTCAGGGGCCCACCTAAACAACAAATTATAACCATTTTATGGTTTAGCTTGTCAACTCTATTTTTTTCCCACAGAGAGAATACTATGAGCACTCTTGGTCGCTTGGTGTTACTCATATGGCTTTTTGTGGTTTTGATAATCAACTCCAGCTACACAGCAAGTTTGACCTCAATCCTCACAGTTCAGCGGCTATCTTCTCCTATCAATGGAATAGATAGTTTAAAAGCTAGTAATGAACCTATAGGGTACCAAGTGGGTTCATTTGCAGAACGTTATTTGACTGAGGACATTGGAATATCCAAATCTAGGCTTGTTGCCCTTGGATCTCCTGAGGCATATGCCAAAGCTCTCCAGCTTGGTCCTGAAAAGGGAGGTGTTGCTGCCATTGTTGATGAACGACCCTATGTTGAAATTTTCTTATCAACCCAGTGCACTTTCAGGATAGTAGGTCAGGAGTTCACCAGAAGCGGCTGGGGGTTTGCATTCCCACGGGACTCCCCTTTGGCCGTTGATTTGTCGACTGCAATTCTACAACTTTCTGAAAATGGTGATCTGCAGCGGATTCACGATAAGTGGCTCATACAAACCGGCTGTAGTTTAGAAAAAGCCGAGATTGATTCGGATCGGCTTCGGTTTAAGAGCTTCTGGGGTCTCTTCCTTATATGTGGGATTGCTTGCCTCGTTGCTCTTTCCATATATTTTTTGCAGATTATGCTGCAGTTACGCCATTCTGATCCTGCTCGACCCACTTCCAATGTGAGCTCAATTGCTGGACGTCTTAAAAGATTTCTTTCACTGATTGATGAGAAGGAAGAACACTCCGATAAAGGAAGTAGAAAGAGGGGGGGAGGCCAAAGATCATCAGAAGACGATGAAATGGGGAGGCAGTGA 2742 0.4398 METKLFRVVSWVLLLVMVPPFVVGDNVNISRPAQVHIGAIFTFDSTIGKVAKIAMQEAVKDVNANRSVLPGTKLVLTMQSSNCSGFVGMVQALRFMATDVVAIIGPQSSVVAHIISHVANELQVPLLSFAATDPTLSSLQFPFFVRTTQSDLQQMTAVAEIVEYYGWKEVITIFVDDDYGRNGVSSLEDSLASRRCRISYKGGIKSGPGVDRSEITDLLVKVALMQSRVIVLHVNPDSGFTVFNVAQYLGMTGNGYVWIATDWLSSVLDSASLPANTMNVLQGVIVLRQHTPDSDRKRTFLSRWSKLTGGSMGLHSYGLYAYDSVWMLAQAIDAFFNQGGVISFSNDSRIHDVQGGNLNLEAMSIFDNGTLLLKKILQSNFVGLSGLMKFDSDKSLVRPAYDIINVVGTGIHQVGYWSNYSGLSVVPPETLYAKPPNRSSASQQLHSVIWPGETLSKPRGWVFPNNGKQLRIGVPLRVSYREFVSPVQGTDLFKGFCIDVFTAAVNLLPYAVPYRFVPFGDGHENPSYTDLVHLITTGYFDGVVGDIAIVTNRTKTVDFTQPYAASGLVVVAPFKKINSGGWSFLRPFTPLMWIVTTCFFFFIGIVVWILEHRINDEFRGPPKQQIITILWFSLSTLFFSHRENTMSTLGRLVLLIWLFVVLIINSSYTASLTSILTVQRLSSPINGIDSLKASNEPIGYQVGSFAERYLTEDIGISKSRLVALGSPEAYAKALQLGPEKGGVAAIVDERPYVEIFLSTQCTFRIVGQEFTRSGWGFAFPRDSPLAVDLSTAILQLSENGDLQRIHDKWLIQTGCSLEKAEIDSDRLRFKSFWGLFLICGIACLVALSIYFLQIMLQLRHSDPARPTSNVSSIAGRLKRFLSLIDEKEEHSDKGSRKRGGGQRSSEDDEMGRQ 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2119 913 Gene3D - 53 398 - -
Bisa09g2119 913 Pfam Bacterial extracellular solute-binding proteins, family 3 492 810 IPR001638 -
Bisa09g2119 913 Gene3D - 579 710 - -
Bisa09g2119 913 SUPERFAMILY Periplasmic binding protein-like I 30 461 IPR028082 -
Bisa09g2119 913 PIRSF IGluLR_plant 3 911 IPR017103 -
Bisa09g2119 913 FunFam Glutamate receptor 465 580 - -
Bisa09g2119 913 FunFam Glutamate receptor 150 302 - -
Bisa09g2119 913 FunFam Glutamate receptor 581 711 - -
Bisa09g2119 913 Pfam Ligand-gated ion channel 811 843 IPR001320 GO:0015276|GO:0016020
Bisa09g2119 913 CDD PBP1_GABAb_receptor_plant 36 427 IPR044440 -
Bisa09g2119 913 Gene3D - 739 775 - -
Bisa09g2119 913 SMART GluR_14 471 812 IPR001320 GO:0015276|GO:0016020
Bisa09g2119 913 PRINTS Metabotropic glutamate GPCR signature 170 187 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bisa09g2119 913 PRINTS Metabotropic glutamate GPCR signature 154 170 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bisa09g2119 913 PRINTS Metabotropic glutamate GPCR signature 135 154 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bisa09g2119 913 PRINTS Metabotropic glutamate GPCR signature 103 129 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bisa09g2119 913 Pfam Receptor family ligand binding region 53 408 IPR001828 -
Bisa09g2119 913 CDD GluR_Plant 468 810 - -
Bisa09g2119 913 FunFam Glutamate receptor 707 814 - -
Bisa09g2119 913 Gene3D - 776 809 - -
Bisa09g2119 913 Gene3D - 150 423 - -
Bisa09g2119 913 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 858 IPR015683 -
Bisa09g2119 913 Gene3D - 465 578 - -
Bisa09g2119 913 MobiDBLite consensus disorder prediction 884 913 - -
Bisa09g2119 913 SUPERFAMILY Periplasmic binding protein-like II 446 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2119 Bisa-ChrBisa09 34001593 34005558 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2119 31 901 Ion Channels AT1G42540 67.574 0.0 1262