Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2117 ATGGATTTTTCCCCACCGATTACCATATTAGAAGGTACTCAAGACAGTTACAGCAAAGACAATGCGTCTGCGATGAAAGACGAGAACTCAGGAGATTTGAACAAACTGAAACAAATGGCAATAGGTAAACCCCCACGCAACCTCTCCCTTATGAGGCATAGCGTTAGCACTAACAGGTTGCTAGCTCAAGCAGATTTGCCTTTTGATACGGGGGTTGTTGCGAGCAAGTCATCTTCTGACGAGAAGGCGGAATTTCTACCCATTTATCGGTCAGGAAGTTGCGCCGAAATAGGACCTAAACAGCACATGGAAGATGAACACCTATGTGTAGATAATCTTACTGAACATCTAGGTTCAGCTTCAAATATTCCTTCCCATGGAGCTTTCTATGGGGTGTTTGATGGTCACGGTGGGACTGACGCAGCAACATATATAAGGAATAACATCCTCAGATTTATGGTTGAGGATCCCCATTTTCCAACTTACTTGGAGAAGGCAATAAAAAATGCCTTTCTGAATGCTGATTATGCATTTGCAGATGCGAGTTTGCTTGATATCTCCTCTGGCACCACTGCTTTAACTGCACTTGTATTTGGAAGGAACCTAATTGTTGCAAATGCTGGGGATTGTCGGGCTGTACTGGGGAGGCGAGGAAGAGCAATAGAGATGTCAAAAGACCACAAACCAAACTGCAAGTCAGAGAGGGCAAGGATTGAGAAACTTGGTGGAGTGGTATATGATGGATACCTGAATGGACAGCTATCTGTTGCACGTGCCCTGGGAGACTGGCACATGAAGGGTCCCAAGGGTTCTGCCTGCCCTTTAAGTGCAGAACCAGAGTTGCAGGAAATCCACTTGATTGAGGATGACGAATTCTTGATCATGGGATGTGATGGTCTCTGGGATGTTATGAGCAACCAATGTGCTGTGACCATGGCAAGGAAAGAGTTGATGCTACATAATGATCCCGAAAGGTGTTCTAGAGAGCTTGTCAGAGAGGCTCTCAAGCGTAATGCCTGTGACAATCTGACCGTCATCGTGGTTTGTTTCTCTCCAGATCCTCCCCCTCGGATAGAGGCACCTCCTCGAGTTAGGAGGAGTATTTCAGCGGAAGGGCTCAATTTACTCAAGGGTGTGCTGGATTGTAACACATGA 1155 0.4606 MDFSPPITILEGTQDSYSKDNASAMKDENSGDLNKLKQMAIGKPPRNLSLMRHSVSTNRLLAQADLPFDTGVVASKSSSDEKAEFLPIYRSGSCAEIGPKQHMEDEHLCVDNLTEHLGSASNIPSHGAFYGVFDGHGGTDAATYIRNNILRFMVEDPHFPTYLEKAIKNAFLNADYAFADASLLDISSGTTALTALVFGRNLIVANAGDCRAVLGRRGRAIEMSKDHKPNCKSERARIEKLGGVVYDGYLNGQLSVARALGDWHMKGPKGSACPLSAEPELQEIHLIEDDEFLIMGCDGLWDVMSNQCAVTMARKELMLHNDPERCSRELVREALKRNACDNLTVIVVCFSPDPPPRIEAPPRVRRSISAEGLNLLKGVLDCNT 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2117 384 SMART PP2C_SIG_2 105 350 IPR001932 -
Bisa09g2117 384 FunFam Probable protein phosphatase 2C 22 74 353 - -
Bisa09g2117 384 Coils Coil 382 384 - -
Bisa09g2117 384 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Bisa09g2117 384 Gene3D - 70 353 IPR036457 -
Bisa09g2117 384 CDD PP2Cc 89 350 IPR001932 -
Bisa09g2117 384 SMART PP2C_4 80 348 IPR001932 -
Bisa09g2117 384 PANTHER PROTEIN PHOSPHATASE 2C 73 348 IPR015655 GO:0004722|GO:0006470
Bisa09g2117 384 ProSiteProfiles PPM-type phosphatase domain profile. 90 350 IPR001932 -
Bisa09g2117 384 Pfam Protein phosphatase 2C 92 342 IPR001932 -
Bisa09g2117 384 SUPERFAMILY PP2C-like 84 351 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2117 Bisa-ChrBisa09 33996816 33998630 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2117 1 381 PP2C-type Phosphatase Gene Family AT2G33700 71.875 0.0 554