Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2114 ATGAGTGAGCCACAAAAGGCTAGTCATACAACTTCTCTTGCCCCCAACTCGTTTCTCTCTCCTGTGGGAAACCCTAACCTCCAAAATCACCATTCTGTTTTCGAAATGAAGGGTGGCAAATCCAAGACTGAATCCAAGAAGGCCGATGCCAAGCTTGCTGTGAACAAGAAAGGTAGCGCCGCCACGAAGGCAGGGAAATCAAGTAAGGGGAAGGCGGCTAAAGACCCTAACAAGCCAAAGAGACCGGCCAGTGCCTTCTTTGTTTTCATGGAGGAGTTTAGGAAGCAATTCAACAAAGAAAATCCCGACAACAAATCAGTGTCTGCTGTTGGCAAAGCCGCTGGGGCAAAATGGAAGTCCATGTCTGATGCTGAGAAAGCACCATATGCAGCTAAGGCAGAGAAACGGAAGGCCGAGTATGAGAAGAGTATGAAAGCCTATAACAAGAAACAGGCTGAAGGTCCAACTGCTGCAGAGGAAGAAGAATCCGATAAATCAGTTTCTGAGGTGAATGATGAGGATGATGGAGATGAAGAGGGCAGTGACGAGGAGGAGGACGATGACTAG 567 0.4797 MSEPQKASHTTSLAPNSFLSPVGNPNLQNHHSVFEMKGGKSKTESKKADAKLAVNKKGSAATKAGKSSKGKAAKDPNKPKRPASAFFVFMEEFRKQFNKENPDNKSVSAVGKAAGAKWKSMSDAEKAPYAAKAEKRKAEYEKSMKAYNKKQAEGPTAAEEEESDKSVSEVNDEDDGDEEGSDEEEDDD 188
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2114 188 MobiDBLite consensus disorder prediction 165 188 - -
Bisa09g2114 188 Gene3D High mobility group box domain 62 166 IPR036910 -
Bisa09g2114 188 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 36 183 IPR031061 -
Bisa09g2114 188 MobiDBLite consensus disorder prediction 1 83 - -
Bisa09g2114 188 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 79 148 IPR009071 -
Bisa09g2114 188 MobiDBLite consensus disorder prediction 1 31 - -
Bisa09g2114 188 MobiDBLite consensus disorder prediction 128 164 - -
Bisa09g2114 188 Pfam HMG (high mobility group) box 79 148 IPR009071 -
Bisa09g2114 188 SUPERFAMILY HMG-box 66 157 IPR036910 -
Bisa09g2114 188 CDD HMG-box_AtHMGB1-like 80 140 - -
Bisa09g2114 188 MobiDBLite consensus disorder prediction 35 53 - -
Bisa09g2114 188 Coils Coil 130 150 - -
Bisa09g2114 188 SMART hmgende2 78 149 IPR009071 -
Bisa09g2114 188 MobiDBLite consensus disorder prediction 97 188 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa09g2114 Bisa-ChrBisa09 33901751 33905344 Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Bisa09g2114 HMG_box 2.3e-23 CL0114