Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2112 ATGAGAGACGGGGCTGTGTCACCCGGTACCTTGGTGGAAGCGCCGCCTGAAGCGTCCATGGATTTTGATTACATGGATGAGCTTTTCTTAGACGGATGCTGGTTGGAGACCACTACAGATGGATCTGATTTCATGCTGCGAAGCCCGTCTACCTCTATTCCCCTTTTTGACCCTTCATTTTCATGGCCTGCCTTGGACACTAATGGGCATGGCAGTCTAGAAGCAAGACAAAGTCCCTTATTTCATGAATTCCAGGAAGCACAAACCAATACTCGATCGAATGGCGAGAGCAAGGATGTAGTTAATGCTGCAGGAGCTATTGATCAATCTGAAATTTATTCAGCTGAAAGCTCAGAAGTCGTCAGGAGGTGGTGGATTGGACCCATGGCTAGTCCCAGCCCTGAATGTTCTGTATTGGAGAGACTAATTAGGGCTCTTGTGTATATCCGAGATTTCAATAGAGACAAAGACATGCTTATACAATTATGGGTGCCAATCAATAGAGGGGGTACGAAGATTTTAACCACTAGTGATCTTCCCTTCTGGCTTGAAACCAGCTGTCAAAATCTCGTAAATTACCGAGAAGTCTCTGTAAAATATGAGTTTGCAGCTGAGGAGGACTCTAAGGGGTTGGTGGCAGGATTGCCTGGTCGAGTTTTTCTAGAAAAGGTTCCTGAGTGGACTCCTGATGTTCGATTTTTCAGAAGTGATGAGTACCCTCGAGTTGACCATGCTCAACAGTACGATGTACGTGGAACTTTAGCGCTTCCAGTCTTTGAGCAAGATAGCAGGAATTGCTTGGGTGTTATTGAGGTTGTGATGACAACCCAGCAGATCAAGTATTTCCCCGAACTTGAAAGTGTTTGCAAAGCACTCGAGGCTGTTGATCTTAGAAGCTCAAAACTTTCAAGCATGCAGAATGTGAAGGCATGCAGCAATTCCTATGAAGCAACACTACCTGAGATTCAAGAGGCATTGAGATCCGCATGTGAAACGTACAAATTGCCTTTAGCTCAAACTTGGGTCCCATGCATCCAACAAGGCAAAGAGGGGTGCCGGCACTCAGATGACAATTATCTACATTGTATTTCTCCTGTGGAGCATGCTTGTTATATTGGCGATCCTTGTGTCCGGGCTTTTCATGAGGCTTGCTCTGAGCATCACTTGTTAAAAGGTCAAGGTGTCTCTGGTGGAGCTTTTATGACCAATCAACCATGCTTCTCAATTGACGTAACTTCCTTAGGCAAGACAGACTATCCGCTGTCTCACCATGCCAGAATTTTTGGGTTGCGAGCTGCTGTTGCTATACGTCTTCGAAGCATCCGTAGAAGTACAGATGACTTTGTCCTAGAGTTTTTCTTGCCCCTAAATTGCACTGACAGTGAAGAACAGAAGAAGTTGCTTACTTCATTGTCCATGATTATACAAAGGGTTTGCCATAGCTTACGGGTCATAACGGATAAAGAACTGGAGGAGGAAACTAGCTTATTAATTAATGAAGTGATAGTCCCAGCTGATAGTAGATCTGCTAGGATGGAGCTCCAACAAAATGGGACAGTTGCCTCATTGGAGACCAAAGAAAAGTCAAATGAAACAGATAATAGACAGTTCTCTCACCTAAGGCAGCAAGAAGACTCTTTTTTAAAAGGAAATCTCGACTCTGTTAGGGAGTGTTCTTTTGATGAGGGGAGCTCACTGATTGTGGGTATAAGTAAGACAGGAGATAAAAGACGGACCAAAGCAGAGAAAACTATCACTCTGCAAGTTCTTCGGAAATATTTTGCGGGAAGCCTAAAAGATGCTGCAAAGAGTATTGGTGTTTGTACTACAACTTTGAAAAGAATCTGCCGCCAGCATGGGATAAAGCGTTGGCCTTCTCGAAAGATCAAAAAGGTTGGTCACTCCTTACAGAAACTTCAACTTGTCATCGACTCAGTTCAAGGTGCCTCTACTGCTTTTCAAATAGATTCCTTCTACTCAAAGTTTCCGGAACTCGCCTGTCCCAATTTTCCAGGAAGCAGCTTGTTCTCAACTTCAAAGCAAAGTGGTCATCCAAATCCATCAAGCACACGGACTGACACTGGCTTGCTAAGCCCAGAAGCACCCTCCTCTTCCTGCAGTCAGAGTTCCAGTTCAAGCCAGTCTTGTTCCAGCATGTCAGAGCACCAGCAATACACACAAAATGTTGCCGGTGGCAAAGATCCTTGGGTTGGAGAAGATTCTGCTGATGGTGTGTTGAAGAGGATCAGAAGTGAAGCAGAGCTAAAATGCTTTAGTCAAGATAGAGCAGAGCTCTTGCCAAGATCCCAAAGCCAGGAAACACTTGGTGAACGTCCAAAAACTGTGTTGAAAAGCAGTCATGCTCACAAAATACCTCAAGGGAAGGATGCTCAGAGAGTAAAAGTCACTTGTGGAGATGACAAAACCCGGTTTCGGATGCCAAAGAATTGGGGTTACGTCAAACTTGTGCGGGAAATTGCTAGGCGATTTAACTTAGATGACATGAGCAAATTTGATATCAAGTATCTGGACGACGACTCCGAGTGGGTATTACTAACTTGTGATGCAGATTTAGAGGAGTGCATTGATGTTTGTCAATCTTCTCAGAGCAGGACCATCAAACTTTGCCTAAGTTTCCAGAGGTCTAGGTCTTCATGA 2658 0.4451 MRDGAVSPGTLVEAPPEASMDFDYMDELFLDGCWLETTTDGSDFMLRSPSTSIPLFDPSFSWPALDTNGHGSLEARQSPLFHEFQEAQTNTRSNGESKDVVNAAGAIDQSEIYSAESSEVVRRWWIGPMASPSPECSVLERLIRALVYIRDFNRDKDMLIQLWVPINRGGTKILTTSDLPFWLETSCQNLVNYREVSVKYEFAAEEDSKGLVAGLPGRVFLEKVPEWTPDVRFFRSDEYPRVDHAQQYDVRGTLALPVFEQDSRNCLGVIEVVMTTQQIKYFPELESVCKALEAVDLRSSKLSSMQNVKACSNSYEATLPEIQEALRSACETYKLPLAQTWVPCIQQGKEGCRHSDDNYLHCISPVEHACYIGDPCVRAFHEACSEHHLLKGQGVSGGAFMTNQPCFSIDVTSLGKTDYPLSHHARIFGLRAAVAIRLRSIRRSTDDFVLEFFLPLNCTDSEEQKKLLTSLSMIIQRVCHSLRVITDKELEEETSLLINEVIVPADSRSARMELQQNGTVASLETKEKSNETDNRQFSHLRQQEDSFLKGNLDSVRECSFDEGSSLIVGISKTGDKRRTKAEKTITLQVLRKYFAGSLKDAAKSIGVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQGASTAFQIDSFYSKFPELACPNFPGSSLFSTSKQSGHPNPSSTRTDTGLLSPEAPSSSCSQSSSSSQSCSSMSEHQQYTQNVAGGKDPWVGEDSADGVLKRIRSEAELKCFSQDRAELLPRSQSQETLGERPKTVLKSSHAHKIPQGKDAQRVKVTCGDDKTRFRMPKNWGYVKLVREIARRFNLDDMSKFDIKYLDDDSEWVLLTCDADLEECIDVCQSSQSRTIKLCLSFQRSRSS 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2112 885 ProSiteProfiles RWP-RK domain profile. 571 652 IPR003035 -
Bisa09g2112 885 Pfam RWP-RK domain 584 632 IPR003035 -
Bisa09g2112 885 CDD PB1_NLP 799 877 IPR034891 -
Bisa09g2112 885 SUPERFAMILY CAD & PB1 domains 789 879 - -
Bisa09g2112 885 MobiDBLite consensus disorder prediction 767 796 - -
Bisa09g2112 885 Pfam PB1 domain 799 877 IPR000270 GO:0005515
Bisa09g2112 885 SMART PB1_new 797 880 IPR000270 GO:0005515
Bisa09g2112 885 MobiDBLite consensus disorder prediction 676 730 - -
Bisa09g2112 885 MobiDBLite consensus disorder prediction 676 737 - -
Bisa09g2112 885 Gene3D - 795 878 - -
Bisa09g2112 885 ProSiteProfiles PB1 domain profile. 797 880 IPR000270 GO:0005515
Bisa09g2112 885 PANTHER PROTEIN NLP8 73 877 IPR045012 GO:0003700
Bisa09g2112 885 MobiDBLite consensus disorder prediction 780 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2112 Bisa-ChrBisa09 33888958 33892394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2112 20 877 NLP Transcription Factor Family AT1G20640 50.741 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bisa09g2112 PB1 2e-17 CL0072