Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2097 ATGGTGGGAGATAAATCGGACAAGGTGGTCTACCTCCATGGGGACCTTGATTTGAAAATTCTCGAGGCTCAGAGTTTGCCAAACATGGACCTATTCACGGACCGTGTCAGCAGAGTATTCTCCGCCTTCAACTCCTGCACTTCTTCACTCTACGGCAAGAAGAAAAAGCGTCACAGAAAAATCATTACAAGTGATCCTTACGTCACTGTTTGCCTCGCCAAATCTACGGTGGCTCGCACCCGTGTCATCTCCAACTCGCAGGATCCCAAGTGGAACGAGCATTTCAGAATCCCTCTCGCGCATCCAGTCTCGCAGGTCGAGTTCTACGTCAAGGACAATGACTTGTTCGGCGCTGATCTCATCGGAGTCGCTATCGTCTCCGCCGAGAGAATCTTATCCGGTGAAGTTATCAGTGATTGGTTCCCCATACTTGGTTCTTTCGGGAAGCCACCCAAACGTGATTGTGCCCTTCGTCTTGAGATGAAATTCACGAAATGCGAGGACAATCCTCTGTATCGCAACGACATTGCAGCCCATCCGGACAATTTCGCAGTGCAGAATTCTTATTTTCCTGTGCGTCACGGAGGATCAGTGACATTATATCAGGACGCACACGTTCCCGAGTCGATGCTACCGGAAATTGGATTGAATGATGGCGTTGTTGGGACCCTCTTTACACATCATCAGAAATGTGTGATTGTGGATACTCAAGGACATGGCAATAACCGCAAGATAACTGCATTTATAGGTGGCCTAGATCTTTGTGATGGCCGGTATGATACACCTGAGCATCGACTTTTCCGTGATCTTGACACTGTTTATAAGGATGATTATCACAACCCTACATTTTCTCTAGAACGCATCTCTTGGATTCTTAGTCCTTCTGCAGAAATTCCCATTGATGATCCAGAACTGTGGGTTTCGAAGGAAGATGATCCTGAAAATTGGCATGTTCAGGTTTTTCGATCAATAGATTCAGGTTCATTGAAAGGATTTCCTAAGCATTTCTGTGAAGCTCAGGCTCAGGTATCAGCTTCAAAAAAGTTCCAACGGTTTATGATTTATGTACACGCCAAGGGAATGATTGTGGATGATGAGTATGTCATTATTGGGTCTGCCAATATCAATCAACGATCTATGGCCGGTTCAAGAGATACTGAGATAGCAATGGGTGCATATCAGCCCCATCATACATGGGGAAACAAAGAGAGACACCCTCGTGGTCAGGTGTATGGGTATAGAATGTCTTTGTGGGCAGAACACATGGCGGTAGTGGATCCATGCTTCAAGGAGCCTGAAGCTTTGGATTGCGTGAGGAAGGTGAACAAGATTGCAGAAGAAAACTGGAACAAGTATACAGCTGAGGAGTTCAGTCCATTGCAGGGTCACCTTCTGAAATACCCTCTGTCCATTGATGCGAAAGGGAGGGTACTCTCCTTACCTGGCTTTGAAACCTTTCCTGATGTGGGGGGTAAGGTACTCGGCTATAGGACTACCTTTCCCGATGCTCTCACCACATAA 1521 0.4655 MVGDKSDKVVYLHGDLDLKILEAQSLPNMDLFTDRVSRVFSAFNSCTSSLYGKKKKRHRKIITSDPYVTVCLAKSTVARTRVISNSQDPKWNEHFRIPLAHPVSQVEFYVKDNDLFGADLIGVAIVSAERILSGEVISDWFPILGSFGKPPKRDCALRLEMKFTKCEDNPLYRNDIAAHPDNFAVQNSYFPVRHGGSVTLYQDAHVPESMLPEIGLNDGVVGTLFTHHQKCVIVDTQGHGNNRKITAFIGGLDLCDGRYDTPEHRLFRDLDTVYKDDYHNPTFSLERISWILSPSAEIPIDDPELWVSKEDDPENWHVQVFRSIDSGSLKGFPKHFCEAQAQVSASKKFQRFMIYVHAKGMIVDDEYVIIGSANINQRSMAGSRDTEIAMGAYQPHHTWGNKERHPRGQVYGYRMSLWAEHMAVVDPCFKEPEALDCVRKVNKIAEENWNKYTAEEFSPLQGHLLKYPLSIDAKGRVLSLPGFETFPDVGGKVLGYRTTFPDALTT 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2097 506 Pfam C2 domain 14 143 IPR000008 -
Bisa09g2097 506 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 223 258 IPR001736 GO:0003824
Bisa09g2097 506 SMART C2_3c 15 140 IPR000008 -
Bisa09g2097 506 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 164 IPR035892 -
Bisa09g2097 506 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 352 379 IPR001736 GO:0003824
Bisa09g2097 506 Gene3D Endonuclease Chain A 311 398 - -
Bisa09g2097 506 Gene3D C2 domain 9 163 IPR035892 -
Bisa09g2097 506 PANTHER PHOSPHOLIPASE D 285 346 IPR015679 -
Bisa09g2097 506 SUPERFAMILY Phospholipase D/nuclease 348 437 - -
Bisa09g2097 506 CDD C2_plant_PLD 8 164 - -
Bisa09g2097 506 SMART pld_4 352 379 IPR001736 GO:0003824
Bisa09g2097 506 SMART pld_4 223 258 IPR001736 GO:0003824
Bisa09g2097 506 ProSiteProfiles C2 domain profile. 1 141 IPR000008 -
Bisa09g2097 506 Pfam Phospholipase D Active site motif 224 258 IPR001736 GO:0003824
Bisa09g2097 506 Pfam Phospholipase D Active site motif 353 379 IPR001736 GO:0003824
Bisa09g2097 506 SUPERFAMILY Phospholipase D/nuclease 220 323 - -
Bisa09g2097 506 Pfam Phospholipase D C terminal 427 496 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2097 Bisa-ChrBisa09 33574385 33581459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2097 326 505 Phospholipase D Gene Family (Wang group) AT4G00240 60.556 1.56e-70 238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g2097 09 33574385 33581459 Bisa09g2097 09 33574385 33581459 ECH