Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2070 ATGGAAGATGTGGAGGCTTGCCATTCGGATTCTTCAGGAGAAAACGAGACATCGAAAGCAAGCAAACCAGAGAGTGTTTCGTTCTTCGGCTTGTTTGCCTTTGCTGATACAATTGACTATGTGTTGATGTTCTTGGGAAGCCTTGGTGCCTGCGTCCATGGAGCTGCTCTTCCTGTATTCTTCATTTTGTTTGGACGTATGATTGATTCTTTGGGACATCTTTCTAAGCATCCTCACAAGTTGTCCTCTCGCATTTCTGAGAATGCTTTGTACTTGGTCTATCTTGGGCTCGTTGTTCTGGCATCAGCTTGGATGGGGGTTGCATTCTGGATGCAAACAGGCGAGAGGCAAACAGCTCGTTTGCGGTTAAAGTATCTACAGTCAGTTTTGAAAAAAGACATTAATTTCTTCGACAACGAAGCCAGAGACGCCAACATCATCTTCCACATTTCGAGTGACGCCATAATGGTACAAGACGCAATCGGTGACAAGACAGGCCATGTCATACGTTACCTTTCGCAGTTCGTTGTTGGATTTGCCATTGGATTTACGTCAGTGTGGCAGCTCACACTACTGACCTTGGCTGTGGTTCCATTGATAGCTGTGGCTGGGGGAGCTTATACTATTACTATGTCTACCTTGTCGGAAAAAGGAGAAGCAGCTTATGCAGAAGCTGGGAAAGTTGCAGAAGAGGTGATTTCTCAAGTTCGTACTGTGTACTCGTTTGTAGGAGAAGAGAAAGCAGTTTCCTCATACTCCAAGTCACTTGATAAAGCTTTGAAACTGGGGAAGAAGAGTGGTTTGGCAAAAGGAGTGGGAGTAGGCTTGACTTATGGACTTTTGTTCTGCGCTTGGGCATTGCTTCTGTGGTTTGCAAGCATACTTGTCAGGCACCACACAACAAATGGAGGAAAAGCTTTCACAACCATCATTAATGTCATCTTTAGTGGATTTGCTCTTGGTCAGGCTGCTCCAAACTTTGGAGCCATTGCTAAAGGGCGTGCAGCTGCAGCCAATATCATGAACATGATTGCTTCGGTTTCAAACACTTGTAAGAGTCTGGAGAAAGGCACTGTCCTGCCACAAGTGAAAGGCACAATTGAATTCTGTGAGGTCTGCTTTTCTTACCCCTCAAGATCCAACATCGTCTTTGAAAATTTGACCTTCTCAGTAGCTTCTGGGAAGACTGTCGCAGTTGTTGGTCCTAGCGGTTCTGGAAAAAGCACAATCATTTCCATGATCCAGCGATTTTATGACCCCGCTTCGGGTAAGGTACTGTTAGATGGACATGACACGAAGAATCTTCAATTGAAATGGTTGAGGGAACAAATGGGTTTGGTTAGCCAAGAACCAGCACTATTTGCCACAACAATATCTGGAAATATTTTACTTGGAAAAGAAGATGCAAACATGAATCAAATCATTGAGGCTGCCAAAGCTGCAAATGCTCATTCTTTCATTGAAGGGTTACCTTATGGTTATCTTACTCAGGTTGGTGAAGGTGGGACGCAACTTTCAGGAGGGCAAAAGCAGAGAATTGCAATAGCAAGAGCTGTGCTTAGAAACCCAAAAATATTACTTCTAGACGAAGCCACCAGTGCTCTTGATGCAGAATCAGAATTCATAGTTCAGCAAGCACTGGAAAAATTAATGTCAAACCGAACAACAATAATTGTTGCTCACCGATTATCCACCATTCGCGATGTAGATACAATCGTGGTGTTGAAGAATGGTCAGGTCGTTGAAAGTGGGACTCATTCAGAATTAATGTCAAGAAATGGAGACTATGTCAACCTAGTGAGTCTGCAGGCATCAGAAGATTGTCCAACAGATTCTAGCGCAGTATCTCGTTGTGGAAGTTCAAGAAATTCAAGCTTTCGAGATGTTTCAGACAATTACAAGTACCCCGATGAATTGAATTCAGTTCCAACCAGAGAGGACCAAAAGTCCATTCCTTCAATCTTGGACTTGTTAAAACTCAATGCTCCTGAATGGCCTTATGCAGTCCTTGGATCAATAGGTGCAGTTATGGCAGGCATGGAAGCTCCTCTTTTTGCTCTTGGAATCACACATATCTTGACTGCGTTCTACTCGCCTCATGCTTCAAGAATCAAGTACGAGGTTGATAGGGTGGCTCTTGTATTTGTTGCTGTGGCTGTTGTCACTGTACCCATTTATCTGCTACAACATTACTTCTTCACGTTGATGGGAGAGCGTCTCACGGCTCGTGTACGCTTGTTAATGTTCTCAGCGATCCTAACCAACGAAGTTGCGTGGTTCGATTTGGATGAGAACAACACTGGATCACTCACAGCTAGGTTAGCTGCAGATGCAACATTAGTGAGAAGTGCTTTGGCTGATAGACTCTCAACCATTATCCAAAATGTTTCTCTGACTGTAACAGCTTTTGTTATTGCCTTCACATTAAGTTGGAGACTGACGGCTGTGGTTGTAGCTTGCTTGCCTCTTCTAATAGGAGCTTCTATCACTGAACAACTATTTCTCAAGGGTTTTGGGGGAGACTACAGTGTTGCTTACTGTAGAGCAACTTCACTCGCACGTGAAGCTATTTCCAACATACGTACCGTTGCTGCTTTTGGCGCAGAAGATCGAATCTCGTTCCAATTTGCTTCTGAATTGAACAAACCCAGCAAGCAGGCTTTGTTAAGAGGCCATATATCAGGCTTTGGATATGGTGTGACACAGCTTTTTGCATTCTGTTCTTATGCACTTGGCCTTTGGTATGCATCAATCTTGATCAAACATAAAGAGTCTAACTTTGGAGACATAATGAAGTCCTTTATGGTTTTGATCATCACTGCTTTGGCCATAGCAGAAACCCTAGCTCTTACTCCAGACATTGTAAAGGGGTCACAAGTTCTAGGGTCAGTTTTTGGTATTCTTCAAAGAAAAACAGCCATCCCTCCAAATGATCACAACTTGAAGATGGTGACTGATCTGAAAGGAGAGATAGAGTTCAAAAATGTGAGCTTTAGCTACCCCATGAGACCAGATATAACTATTTTCCAGAACTTAAACCTGAAGGTTAGATCAGGAAAGAGTCTTGCAGTGGTGGGTCAAAGTGGTTCTGGGAAGAGCACTGTGATTTCATTAGTGATGAGATTCTATGACCCAACTTCTGGGATGGTCATGATCGATGGAAGTGATATTAAAACCCTAAACTTGAGATCCTTGAGACTCAAAATAGGTCTGGTTCAGCAAGAACCTGCTTTATTCTCCACCACAGTGTATGAAAACATCAAGTATGGAAATGAACATGCATCAGAAATTGAGGTAATGAAAGCAACAAAAGCAGCAAATGCTCATGAATTCATCAGCAGAATGCCTGAGGGGTATCAAACAGAGGTGGGTGAGAGAGGAGTTCAACTATCAGGAGGTCAAAAACAGAGAGTAGCCATAGCTAGGGCCATTCTAAAAGACCCATCAATTCTTCTTCTTGATGAAGCAACAAGTGCTTTGGACACAGTTTCAGAGAGGCTGGTCCAGGAAGCTCTGGAGACGCTCATGGAAGGAAGAACAACGATCTTAGTGGCACACAGATTGTCAACTGTTCGTAATGCAGATAATATAGCTGTGTTGCAGAATGGGAAGGTGGCTGAAATGGGAAGCCATGAGAGGCTGATTGCTAAATCAGGAAGTATATATAAGCAGTTGGTGAGTTTACAACAGGAAAAGAGTGATCAGATATTGAATTGA 3717 0.4321 MEDVEACHSDSSGENETSKASKPESVSFFGLFAFADTIDYVLMFLGSLGACVHGAALPVFFILFGRMIDSLGHLSKHPHKLSSRISENALYLVYLGLVVLASAWMGVAFWMQTGERQTARLRLKYLQSVLKKDINFFDNEARDANIIFHISSDAIMVQDAIGDKTGHVIRYLSQFVVGFAIGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYAEAGKVAEEVISQVRTVYSFVGEEKAVSSYSKSLDKALKLGKKSGLAKGVGVGLTYGLLFCAWALLLWFASILVRHHTTNGGKAFTTIINVIFSGFALGQAAPNFGAIAKGRAAAANIMNMIASVSNTCKSLEKGTVLPQVKGTIEFCEVCFSYPSRSNIVFENLTFSVASGKTVAVVGPSGSGKSTIISMIQRFYDPASGKVLLDGHDTKNLQLKWLREQMGLVSQEPALFATTISGNILLGKEDANMNQIIEAAKAANAHSFIEGLPYGYLTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEFIVQQALEKLMSNRTTIIVAHRLSTIRDVDTIVVLKNGQVVESGTHSELMSRNGDYVNLVSLQASEDCPTDSSAVSRCGSSRNSSFRDVSDNYKYPDELNSVPTREDQKSIPSILDLLKLNAPEWPYAVLGSIGAVMAGMEAPLFALGITHILTAFYSPHASRIKYEVDRVALVFVAVAVVTVPIYLLQHYFFTLMGERLTARVRLLMFSAILTNEVAWFDLDENNTGSLTARLAADATLVRSALADRLSTIIQNVSLTVTAFVIAFTLSWRLTAVVVACLPLLIGASITEQLFLKGFGGDYSVAYCRATSLAREAISNIRTVAAFGAEDRISFQFASELNKPSKQALLRGHISGFGYGVTQLFAFCSYALGLWYASILIKHKESNFGDIMKSFMVLIITALAIAETLALTPDIVKGSQVLGSVFGILQRKTAIPPNDHNLKMVTDLKGEIEFKNVSFSYPMRPDITIFQNLNLKVRSGKSLAVVGQSGSGKSTVISLVMRFYDPTSGMVMIDGSDIKTLNLRSLRLKIGLVQQEPALFSTTVYENIKYGNEHASEIEVMKATKAANAHEFISRMPEGYQTEVGERGVQLSGGQKQRVAIARAILKDPSILLLDEATSALDTVSERLVQEALETLMEGRTTILVAHRLSTVRNADNIAVLQNGKVAEMGSHERLIAKSGSIYKQLVSLQQEKSDQILN 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2070 1238 Pfam ABC transporter 385 533 IPR003439 GO:0005524
Bisa09g2070 1238 MobiDBLite consensus disorder prediction 1 20 - -
Bisa09g2070 1238 SMART AAA_5 1018 1204 IPR003593 GO:0016887
Bisa09g2070 1238 SMART AAA_5 393 579 IPR003593 GO:0016887
Bisa09g2070 1238 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 669 956 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa09g2070 1238 ProSitePatterns ABC transporters family signature. 505 519 IPR017871 GO:0005524|GO:0016887
Bisa09g2070 1238 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 991 1227 IPR003439 GO:0005524
Bisa09g2070 1238 CDD ABC_MTABC3_MDL1_MDL2 367 603 - -
Bisa09g2070 1238 CDD ABC_6TM_Pgp_ABCB1_D2_like 658 974 - -
Bisa09g2070 1238 CDD ABC_6TM_Pgp_ABCB1_D1_like 43 327 - -
Bisa09g2070 1238 Gene3D - 981 1237 IPR027417 -
Bisa09g2070 1238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 980 1229 IPR027417 -
Bisa09g2070 1238 SUPERFAMILY ABC transporter transmembrane region 657 970 IPR036640 GO:0005524|GO:0016020
Bisa09g2070 1238 Pfam ABC transporter transmembrane region 44 316 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa09g2070 1238 Pfam ABC transporter transmembrane region 673 942 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa09g2070 1238 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 367 602 IPR003439 GO:0005524
Bisa09g2070 1238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 603 IPR027417 -
Bisa09g2070 1238 FunFam ABC transporter B family member 4 981 1235 - -
Bisa09g2070 1238 Pfam ABC transporter 1010 1158 IPR003439 GO:0005524
Bisa09g2070 1238 MobiDBLite consensus disorder prediction 1 17 - -
Bisa09g2070 1238 FunFam ABC transporter B family member 4 357 610 - -
Bisa09g2070 1238 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 44 332 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa09g2070 1238 CDD ABC_MTABC3_MDL1_MDL2 991 1229 - -
Bisa09g2070 1238 SUPERFAMILY ABC transporter transmembrane region 31 340 IPR036640 GO:0005524|GO:0016020
Bisa09g2070 1238 ProSitePatterns ABC transporters family signature. 1130 1144 IPR017871 GO:0005524|GO:0016887
Bisa09g2070 1238 Gene3D ABC transporter type 1, transmembrane domain 30 958 IPR036640 GO:0005524|GO:0016020
Bisa09g2070 1238 Gene3D - 357 610 IPR027417 -
Bisa09g2070 1238 PANTHER ABC TRANSPORTER B FAMILY 6 680 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2070 Bisa-ChrBisa09 33140372 33149880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2070 16 1237 Calmodulin-binding Proteins AT2G36910 50.278 0.0 1226