Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2064 ATGGACCAGAAGGACATCGCAAGATTCTTGACTACAACTATTGACAATTTCATTCAAGACCGATTAATTAACAAAGAAGGAAGGATCCAACACAAAGAACGGTGTGCAGAGAGGTTAGCAGCTGAAGATGGATGCTGTGACAAAGACAGCGAGGTTCAGTACTCTGATCAGGCAGTACTAGCAAATCTAGATTGGGGTATAGAAGCCCTCGAAGAAGCTATCAATACCTTCAATATGGAAACTAAGATTGCAAGACTAGATTATGCTGAGAAGATGTTGCAAGTGTGTGCCATGTTGAATCCTAATAAAAAAACTGCTGGAGTCCCCAATTTCTACCTCTCAGCTTGGGCTCACCTCAATCTATCCTTCCTATGGAAGTTGCGCAACAATATTCAAAATTCTGTTTTCCACACACTAGAGATGTTCATAGTCGATCCTTTCTTCTCGCGAATTGATTTTGCTCCTGAACTCTGGAAAGATCTGTTTCTTCCACACATGAGCTCCATTGTGGGGTGGTATTCAGAGCAGAGGCATAAGCTTACGATGGAAGTCATACCTGACGCTTCTGATTTGTCCTTTACAGTTGACTTTGATCAATTCTTCAATGAGTCTTTGGTATTTACTATGAGGCCACATCAATTAGAAAAATTGCAGAAGCTGGAGCAGCTTTATGGAGAATCACTAGATGAGAACACAAGACTTTATGCAAAGTATTATAAAGATTGCACTAACTCTGATTCAACCTCCAGTAAGAAGGTGGTTCCAATGCTGCCAATAGCTGAGCCACCAATGACTCCTTTGCATGAGTTGAGCTGTTCTGTTCCTGATTATGTGAAATTCGGTCCTATATTGCCCAAGAGTGCTGGGTTTTCTCCAGTTCTGAGATCGAAAGATGGTGCTAATGAAACAATCAGGCATTCACGAAAGGTGGGAAAGTCATCATCTATATGGGGTGCTAAGGAGAGTATCACTGAAGAGTCTGAAGATGATTTGGATTATGATCTCAATGATGCAAACGTGGTATCAGTCAATAAAACTAGGACTGTTTTGTCTCCTAGAATGAAGATGACCAAAGTTGAGGAGACTGAACAAAAAATATCTCAATCGAACAAGAATAGTCAAATATATTCTCCTACAGTTTTCTCTCCCTTGGATTCTCCTATAACTCCTTCCAAAAATTCATCTTCAAATCTTGATATGCACGCTAAAGGAGAACCCAAGTCATTGCGCTTATTGTCTAGGCGTTTCTCAGACTCAACTATTTCCAACTCTTCACCATTGTCACCTCACATGAGCACTGATCACAGCATCAGCTCTGATGACTCTGACAATGAAGTCATGGGTGTGAAGAACAGTCAGAGGAAAAACCATAACCCAGCAAAGATTATGAATCATGACACAGAGTGCATCGCATGCAATGACAATTCCATTTGTGAGAGTGATGAGGGACATAGCAGCTTTATTTCATTGCCGAAATCGGAGAAGCTTACTATTCGATCAAGACCACCCAAAGATTTTGTTTGCCCCATCACAGGTCAGATATTTTGTGATCCTGTCACCCTTGAAACTGGTCAGACATATGAAAGAAAAGCGATTCAGGAGTGGCTTAAAACAGGAAATACAACATGTCCCATCACACGACAACCTATCTCCGCGAGCATATTACCCAAAACAAACTATGTTTTGAAGAGATTGATAACATCCTGGAAAGAACAGCATCCTGAACTAGCTCAGGAGTTTTCAAATTGGGACCCATTAAGAGGTTCTCTGAATTCTCCCTCCATCAAAGACATCCAAGTGGTCTCTATTATGCACAAAACAACTGATTTACCAGCTAGTAAGGACACAAATAATTATATTACACTAAGGAGCAAAAGATTTATGCATGTCACTGTTTCAACATCACCAACTAGTGTAATAACTCAAGCTGCAGTTGAAACAATCATAAATTGTTTGAAACCTTATATTTCAAGTCTCTGTACGTCAGAAAACTTGCAAGAATGTGAAGATGCTGTACTGGCAGTAGCTAGATTATGGAAGGACGCAAAGGCTGATCCTCAGGTTCATGCTTTTTTATCAGCACCAACTGTTATAAATGGTTTAGTGGAAATACTTTCAGCTTCTCTGAACAGAGAAGTTCTGAGAACATCAATTTGTATTCTTTCTGAGCTAATTTTTGTAGACGAAAGTGTTGGAGAAATACTTACCAGTGTGGATTCCGATCTTGACTGCTTGGCTACTTTGCTTAAGAATGGTTTGGTAGAGGCTTCTGTTCTGATTTACCAACTGAGGCCAGTTTGTGATAAACTTTCAGCTCATGAACTTATACCCTCCATTATGGAGCTGATCCAGAACAAGAATGAGGAGTTGGATGATCTCCCATTGTTTATGGACCCAAAAGATGCAGCAGTAGCCATTCTTGAGCAGATTTTGATAGGAGGGGATGAATATAGCAGGTCCCTCAATGCATTGAGTGTTATTTCAGCAAATGGAATTCCAGTCTTGGTGAAGTATTTTGAAAGGCCTGAAGGAAGGAGGTCTGTTGTTTCCATACTCCTGTGTTGTATGCAAGCTGAAAAAAGTTGCAGGAGCCTAATAGCCAACAGAATTGAATTATCTTCTGTTCTTGAATTATTTCATATTGGCAATGACACTGTCAGAGGAATTTCTGTGGAGTTTCTCTCACAGCTGGTTCAATTGCATAGAAGGACATTGTGCAACCAAATATTGCAGATAATCAAGGATGAAGGAGCATTTAGTACCATGCATACGTTTCTCGTGTATCTTCAGATGGCTCCTATGGAGCATCAACTTGCCACTGCTAGTCTTTTGCTTCAGCTTGATCTCCTGGTTGAGCCTCGAAAGATGAGCATTTACAGGGAAGAAGCTGTAGAGTCACTGATAGATGCACTTTGGCGAAAGGACTTCTCAAATACTCAAACGAAGGCTTTAGATGGTTTACTATTTCTTATTGGGCATGTCACTTCCACAGGAAAGTCATACACTGAAGCCTGGCTGCTCAAGATTGCAGGATTTGATCAACCTTACAATACTTTAATGAAAGATGGGCAGTTGGAAAATTATGACAGCAGTTTGATGGAAACAATGGAGGATGAAGAAAACGCTATGAGCTCTTGGCAGAAGAGGTTAGCTTTTGTTCTTTGCAACCATGAAAATGGTTGCATATTCAAAGCTTTGGAAGAATGCCTAAGGAGTACTTCCTTCGAGATGACAAAATCATGTCTTGTCATTGCCACATGGCTCATACACATGCTCTCTTCTATTCCTGATACTGGTATAAGGGATGTTGCTCGCATCTCCTTGTTTGAAAAACTTATAAATCTCCTCCAATCATCCAAGAACCTGGAGGAAATGATCATGGTTTCCCTTGCATTGAAGACCTTTATTAGTGATCCAATTGCACTTGAAGCACTTGGAGTTCATGCCAAAAACATCTATTTAACATTAAGAAAGTTGAAGAAATATTCAGTGGTGGCGGGTGATATTATGAAAGCTCTATTGAATTTAAAATCTGTTGATGTGGCAGCATTATGGAGTTGTACTGAAGTTGTCGAGTTGGATTTGAGCTCCAACGGAGAGGTCCTTTCTTTGCTTTATGTGAATGGTCGGGTCTTGAGTGGACACTCTGATGGAACTATCAAGGTATGGGATGCCAGGAAGAGAGTATTAAGATTGATTCATGAAACTCATGTACACACAAAAGCTGTAACATGTCTCTGTTCTTCAGGTGATAAACTGTACAGTGGCTCCTTAGACAAAACCATCCGGGTTTGGACAATAAAATATGATGAGATTCAGTGTATTCAAATTCATGACATTAAAGAGGCAGTGTCTGAGTTGATAGCTAATGATAAGTTGGCTTGCTACGTGTATAATTGGTCGGAGGCTCCAAAGCTTGTTAATTTCAACAAATACGTGAAATGCCTTGCTTTGGATGGGGACAAACTATATTGTGGCTGCTCTGGTTACAGTGTTCAGGAGGTAGACTTGTCGAATTATACATCAAACACATTTTTCTCTGGTACGAGAAAACTATTGGGAAAACAAACCGTACACTCGCTTCAAATTCACGACGGTTTTCTGTTTGCTGGTGGGTCTTCGGTTGATGCAACTGCTGGAAAGATATTTTCACTGTCGTCCAAAGCAGTGGTGGGATCACTTTCAACAGGAATTGACATTCACCGCATAACTATAAACAGTGACTTCATATTTACTGGCACAAAATGTGGGACCATCGAGGTGTGGGCGAAAGATAAGCTAAGCAGAGTGGCTTCCATCAAAATGGCTGGTGGTCACACAAAAATCACATCGTTAGTGTCAGATGCAGATGGTGTTATGCTTTTTGTTGGTTCCTCTGACGGCAAGATCCAGGTTTGGGCTTTGGATTAG 4410 0.4057 MDQKDIARFLTTTIDNFIQDRLINKEGRIQHKERCAERLAAEDGCCDKDSEVQYSDQAVLANLDWGIEALEEAINTFNMETKIARLDYAEKMLQVCAMLNPNKKTAGVPNFYLSAWAHLNLSFLWKLRNNIQNSVFHTLEMFIVDPFFSRIDFAPELWKDLFLPHMSSIVGWYSEQRHKLTMEVIPDASDLSFTVDFDQFFNESLVFTMRPHQLEKLQKLEQLYGESLDENTRLYAKYYKDCTNSDSTSSKKVVPMLPIAEPPMTPLHELSCSVPDYVKFGPILPKSAGFSPVLRSKDGANETIRHSRKVGKSSSIWGAKESITEESEDDLDYDLNDANVVSVNKTRTVLSPRMKMTKVEETEQKISQSNKNSQIYSPTVFSPLDSPITPSKNSSSNLDMHAKGEPKSLRLLSRRFSDSTISNSSPLSPHMSTDHSISSDDSDNEVMGVKNSQRKNHNPAKIMNHDTECIACNDNSICESDEGHSSFISLPKSEKLTIRSRPPKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLKTGNTTCPITRQPISASILPKTNYVLKRLITSWKEQHPELAQEFSNWDPLRGSLNSPSIKDIQVVSIMHKTTDLPASKDTNNYITLRSKRFMHVTVSTSPTSVITQAAVETIINCLKPYISSLCTSENLQECEDAVLAVARLWKDAKADPQVHAFLSAPTVINGLVEILSASLNREVLRTSICILSELIFVDESVGEILTSVDSDLDCLATLLKNGLVEASVLIYQLRPVCDKLSAHELIPSIMELIQNKNEELDDLPLFMDPKDAAVAILEQILIGGDEYSRSLNALSVISANGIPVLVKYFERPEGRRSVVSILLCCMQAEKSCRSLIANRIELSSVLELFHIGNDTVRGISVEFLSQLVQLHRRTLCNQILQIIKDEGAFSTMHTFLVYLQMAPMEHQLATASLLLQLDLLVEPRKMSIYREEAVESLIDALWRKDFSNTQTKALDGLLFLIGHVTSTGKSYTEAWLLKIAGFDQPYNTLMKDGQLENYDSSLMETMEDEENAMSSWQKRLAFVLCNHENGCIFKALEECLRSTSFEMTKSCLVIATWLIHMLSSIPDTGIRDVARISLFEKLINLLQSSKNLEEMIMVSLALKTFISDPIALEALGVHAKNIYLTLRKLKKYSVVAGDIMKALLNLKSVDVAALWSCTEVVELDLSSNGEVLSLLYVNGRVLSGHSDGTIKVWDARKRVLRLIHETHVHTKAVTCLCSSGDKLYSGSLDKTIRVWTIKYDEIQCIQIHDIKEAVSELIANDKLACYVYNWSEAPKLVNFNKYVKCLALDGDKLYCGCSGYSVQEVDLSNYTSNTFFSGTRKLLGKQTVHSLQIHDGFLFAGGSSVDATAGKIFSLSSKAVVGSLSTGIDIHRITINSDFIFTGTKCGTIEVWAKDKLSRVASIKMAGGHTKITSLVSDADGVMLFVGSSDGKIQVWALD 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2064 1469 MobiDBLite consensus disorder prediction 419 435 - -
Bisa09g2064 1469 Gene3D - 636 1149 IPR011989 -
Bisa09g2064 1469 SMART WD40_4 1426 1467 IPR001680 GO:0005515
Bisa09g2064 1469 SMART WD40_4 1229 1266 IPR001680 GO:0005515
Bisa09g2064 1469 SMART WD40_4 1387 1423 IPR001680 GO:0005515
Bisa09g2064 1469 SMART WD40_4 1188 1224 IPR001680 GO:0005515
Bisa09g2064 1469 Pfam WD domain, G-beta repeat 1232 1265 IPR001680 GO:0005515
Bisa09g2064 1469 Pfam WD domain, G-beta repeat 1437 1466 IPR001680 GO:0005515
Bisa09g2064 1469 Pfam WD domain, G-beta repeat 1206 1224 IPR001680 GO:0005515
Bisa09g2064 1469 ProSiteProfiles U-box domain profile. 501 576 IPR003613 GO:0004842|GO:0016567
Bisa09g2064 1469 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 1468 - -
Bisa09g2064 1469 MobiDBLite consensus disorder prediction 366 401 - -
Bisa09g2064 1469 ProSiteProfiles Trp-Asp (WD) repeats profile. 1236 1268 IPR001680 GO:0005515
Bisa09g2064 1469 SUPERFAMILY ARM repeat 642 1003 IPR016024 -
Bisa09g2064 1469 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1435 1469 - -
Bisa09g2064 1469 MobiDBLite consensus disorder prediction 419 461 - -
Bisa09g2064 1469 Gene3D - 1172 1469 IPR015943 GO:0005515
Bisa09g2064 1469 ProSiteProfiles Trp-Asp (WD) repeats profile. 1435 1469 IPR001680 GO:0005515
Bisa09g2064 1469 CDD RING-Ubox_PUB 503 555 IPR045210 -
Bisa09g2064 1469 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 490 582 IPR013083 -
Bisa09g2064 1469 SMART Ubox_2 505 569 IPR003613 GO:0004842|GO:0016567
Bisa09g2064 1469 Pfam U-box domain 503 573 IPR003613 GO:0004842|GO:0016567
Bisa09g2064 1469 SUPERFAMILY RING/U-box 500 574 - -
Bisa09g2064 1469 ProSiteProfiles Trp-Asp (WD) repeats profile. 1211 1224 IPR001680 GO:0005515
Bisa09g2064 1469 MobiDBLite consensus disorder prediction 442 458 - -
Bisa09g2064 1469 MobiDBLite consensus disorder prediction 361 404 - -
Bisa09g2064 1469 SUPERFAMILY WD40 repeat-like 1208 1468 IPR036322 GO:0005515
Bisa09g2064 1469 PRINTS G protein beta WD-40 repeat signature 1454 1468 IPR020472 -
Bisa09g2064 1469 PRINTS G protein beta WD-40 repeat signature 1211 1225 IPR020472 -
Bisa09g2064 1469 PRINTS G protein beta WD-40 repeat signature 1253 1267 IPR020472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2064 Bisa-ChrBisa09 33037707 33045440 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2064 492 752 U-box Gene Family AT1G23030 30.970 3.97e-18 88.2