Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2052 ATGTCGACCTCGGGTCAGGATCACGGCCCTGGGCACCACCATCACCATCACCATCATCATCACAATCACCATCACCATCACCATCACCTCTCTCAATTCCAATTCCAGCTTCTCCACTCCCATTCTCAGCTCCATCACGATCGCACTCTCACTCCCTTCCCTCCCACTCCTCAACCTCAGTCCTTCCCTTCTTCCGACGACGCCCATTCTGCCTTTGCTAAGCTTGCCTTGAATCAAAGATATGAAATTGAACGCTCCAAGTCTCAGACGAGTAGTATTGAAGTAGATCCAAGTCTGAGCAAAGTAGTTAATCCTTCTTCACTTAAAAGTGAGCCTGGCATAAGTGGAAAGCATCACGGTAAATCAAAAGTTTCAAGAAATGCAAAATCAGGGATTCGAAGATCAAATGCTGAGTCTCCGAAGTCGGCTCCAGTTAACAATTGCCGTTATGACAGTTCCTTAGGACTTTTAACCAAGAAATTTGTCAACCTAATTCAGGAAGCTAAGGATGGAACCCTGGATCTAAATAAAACCGCTGAGATCTTGGAGGTCCAGAAAAGGAGAATTTATGATATTACAAATGTTCTTGAAGGAATAGGATTGATAGAGAAAACTTCGAAGAACCATATACGGTGGAAGGGATATGATGGGCTAAGGCCAGGCGAGCTGGACGATCAAGTTACTAGATTAAAGGCTGAAGTTGAAAGTCTATATTCAGAGGAATGTCAACTTGATCATTTTATAAGGAAAAAGCAAGAGCTCTTAAGAACTTTGGAGGAAAATGAAAACTTTCAAAAGTACCTTTTTTTGACTGAGGACGACATTCTTAGCCTTCCATGCTTCCAGACTCAAACAGTTATCGCAATTAAAGGGCCACAAGCCAGTTTCATTGAAATTCCTGATCCTGATGAGGATAATGTTTTCCAGCAAAGGCAGTATAAAATGATTGTCAGAAGCACTACTGGACCAATAGATTTGTATCTTTTGAGCAAACACAATGCCAGTTATGAGGATGTTAGTGTCAAACAGGCTCAATCAACAGATACTTCATGGAACAGAGGCCAGTTTGGATTGAAGAGTGCGGGATTACGAGTAGAAAACCAAGATGCTCAGAAAAATTCTTCTCAAAGTTTTGGTTCGCTGGGCTCAGAGCAACCTGGCATTCAGAAAATCACCCCTACCGATTTTGATATCGAAAATGACTATTGGTTCCAGTCAGAGCATGGATTGACCTTAACAGATATGTGGGCAAATGAGCAGTTAGTTGAGATAGATGATCTCCTTCAAGATGATTATTCCAATGGAGGTGTGGCGTTCAGTCAAGCACCAGCTTCACAGAAGACGTGTTCAATATGTAAATGA 1362 0.4222 MSTSGQDHGPGHHHHHHHHHHNHHHHHHHLSQFQFQLLHSHSQLHHDRTLTPFPPTPQPQSFPSSDDAHSAFAKLALNQRYEIERSKSQTSSIEVDPSLSKVVNPSSLKSEPGISGKHHGKSKVSRNAKSGIRRSNAESPKSAPVNNCRYDSSLGLLTKKFVNLIQEAKDGTLDLNKTAEILEVQKRRIYDITNVLEGIGLIEKTSKNHIRWKGYDGLRPGELDDQVTRLKAEVESLYSEECQLDHFIRKKQELLRTLEENENFQKYLFLTEDDILSLPCFQTQTVIAIKGPQASFIEIPDPDEDNVFQQRQYKMIVRSTTGPIDLYLLSKHNASYEDVSVKQAQSTDTSWNRGQFGLKSAGLRVENQDAQKNSSQSFGSLGSEQPGIQKITPTDFDIENDYWFQSEHGLTLTDMWANEQLVEIDDLLQDDYSNGGVAFSQAPASQKTCSICK 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2052 453 Pfam E2F/DP family winged-helix DNA-binding domain 151 214 IPR003316 GO:0005667|GO:0006355
Bisa09g2052 453 MobiDBLite consensus disorder prediction 10 32 - -
Bisa09g2052 453 SUPERFAMILY "Winged helix" DNA-binding domain 149 212 IPR036390 -
Bisa09g2052 453 Gene3D - 221 332 - -
Bisa09g2052 453 SUPERFAMILY E2F-DP heterodimerization region 225 331 IPR037241 -
Bisa09g2052 453 MobiDBLite consensus disorder prediction 87 111 - -
Bisa09g2052 453 MobiDBLite consensus disorder prediction 129 145 - -
Bisa09g2052 453 PANTHER TRANSCRIPTION FACTOR E2F 99 421 IPR015633 GO:0000978|GO:0006357
Bisa09g2052 453 MobiDBLite consensus disorder prediction 87 145 - -
Bisa09g2052 453 MobiDBLite consensus disorder prediction 1 68 - -
Bisa09g2052 453 CDD E2F_DD 225 332 IPR032198 GO:0046983
Bisa09g2052 453 SMART E2F_TDP_2 149 214 IPR003316 GO:0005667|GO:0006355
Bisa09g2052 453 FunFam E2F transcription factor 1 143 216 - -
Bisa09g2052 453 Pfam E2F transcription factor CC-MB domain 230 329 IPR032198 GO:0046983
Bisa09g2052 453 Gene3D - 143 216 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2052 Bisa-ChrBisa09 32798765 32804125 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2052 27 418 E2F-DP Transcription Factor Family AT1G47870 44.471 5.61e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Bisa09g2052 E2F_CC-MB 6.8e-26 No_clan