Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2039 ATGTACACTGACTCAGTCAGTCATGTCGGAGCCAAAGAAAAGCAAGAGAGAAAAGATGAAGATCGATTGGCTTCACTCTCATGGAAAGGTTGGTTGCTTTTGAAGATAGAAACAAAGTTCTCTTGTCATTTCACAGTACTGCTTTTCAGCTTGCCTGATGAAGCCGTTGAAGGAAATGCAGTGTCACTCTGGTTTGTTTGGGTTCCAAAGGCTTTGAATTCTGAGTTATGGCATGCTTGCGCAGGCCCTCTCGTGTGCTTGCCTCACCTGGGAAGTCTTGTTTATTACTTCCCTCAGGGACACAGTGAACAGGTGGCAGCTTCCACTAGAAGAACAGCATCCTCCCAAATTCCAAGCTATCCCAATGTGCCATCTGAATTGCTGTGCCAACTTCAAAGTGTCACACTTCATGCAGACAGAGATACAGACGAAATCTATGCTCAAATGACTCTGCAGCCAGTGAATTCTGAAAAGGAAGTGGTTCCAATATCTGATCTTGGAATAAGGCACAGTAAACATCCAAGTGAATTCTTCTGTAAAATTTTGACAGCTAGTGACACAAGCACACATGGTGGCTTTTCTGTACCACGCCGGGCTGCAGAAAAGCTCTTCCCTCCATTGGATTACACGGTCCAACCCCCAAGTCAAGAATTTGTTGTCCGAGACTTGCACGATAATACCTGGACATTCCGACATATATACCGTGGCTCAAAAAGGCTTAAAGCAGGTGATGCTGTCATTTTCGTCAGGGATAAGAAATCACAATTGTTAGTTGGAGTGAGGCATGCAAATAGTCAACACACAACACTGCCATCTTCAGTCCTTTCTGCAGATAGTATGCACATTGGTGTGCTTGCTGCTGCAGCTCATGCTTCTGCTAATCAAACCCCATTCACCATTTTCTACAATCCCAGGGCATGCCCTTCAGAATTTGTTATTCCACTGGCTAAATACAGAAAAGCTGTATATGAGACTCAGCTCTCTGTTGGCATGAGATTTGGTATGATGTTTGAGACTGAAGAATCAAGTAAGCGAAGATATATGGGTACTATTGTTGGTATTAGTGACTTGGATCCTTTGAGGTGGCCTGGATCTAAGTGGAGAAATATTCAGGTGGAGTTGGACGAACCAGGCTGTGGCAATAAGCAGAACAGAGTTAGCTCATGGGAAATTGAGATTCCTGACAATCTCCTTATCTTTCCTTCTTTGACTTCAACACTGAAAAGGCCGTTGCATTCTGGGATTTTAGAAAATGAGTGGGGAAATTTGTTAAGAAGACCTTTTGTAAATGGAAACGTGGACTTATCAAACTCTACAGAAAATCTCTACTCAGAACACCTGATGAAACTTCTTTTTAAACCACTAATGGTTAATAGTCCTGGAAATTTTTCATCACTTCCTCAAAAGACTAAGACTACACTAGCAGAAGATAACCAAAAATTTCATGCATCATGTTCAGAAAGCTTACCACTAAAAGATTTACATCATTCTCAATCTTTCCCGGACCAATCTAGCTCCTTTAACTTGAATTCTCTGGGAAAAATTAATAATCCTCCCTCATCTGCAACAATTACTGATGAGTCAAAGTCAAAATCTGAGGTTTTAGCTGATCATGCTTTTGACTTGCCTTCCATGGAAGGCTACAACATTGAAAAAATGGCTGTAAACACTATGAATTCTCAAAGCCTTGCAGGTCAGTCAACATTCCTTCAACAAGACCAGAGTCTATGGCCTCAGATAGAATCATCAATACCCCATACTCAACTGGCTGATGTGACCCAATCTGATTTTGCTGTTCTAAATAGTGTATTTCCTCAGCTAGACATTGAAGAATGGATAGTCAATTCTTCTCAAGAACAGGCTTTCCTTCTCCCTCAAGCAACTACTAATACCCCTTTACCTTTAATGAGCCACGACATGTGGGATCATCATGTCAAGAATTTGAAGATCTCACCTCAATCAGAGCAGCTAATGACCACATGTCATAAAAGGGTTTATGACAATGTCAATGTTGATATTAGCAACATTTTAGGTAGTATGGCTGATCCTTCTGCTTCATGTACCACTTTGGATGAGTTTTGCACATTGAAGGAAGGGGTCTTTCAGAACCCTTTAGATTGCATGGTGAGCAATGTAAGTTCGAGCCAAGACATGCAGTCTCAGATGACGTCAGTAAGTTTGGCGGAGTCACGTGCTTTTTCCTTGCAAGACAACATAGGTGGCACTTCTTCAAGCCATGTTGATTTTGATGAAAGCAGCTTTCTTCACAATAACTCATGGCATCAAGTATCTGCACCCAAGAGAACCTATACTAAGGTTCAAAAGGCAGGATGTGTAGGAAGATCAATAGATGTAACCACATTCAAGAACTACGAGGAACTGATCTCTGCAATAGAAGGCATGTTTGGACTTGAGGGTTTGCTAAATGACACAAGAGGTTCAGGATGGAAACTGGTATATGTAGATTATGAGAATGATGTTCTCCTTGTTGGGGATGATCCTTGGGAGGAATTCGTGGGGTGTGTAAGGTGCATCAGAATATTATCACCTTCAGAAGTTGAGCAGATGAGTGAAGAGGGGATGAAGCTTTTAGACAGTGCTACAATGCAAGGTTCCATATGA 2622 0.4172 MYTDSVSHVGAKEKQERKDEDRLASLSWKGWLLLKIETKFSCHFTVLLFSLPDEAVEGNAVSLWFVWVPKALNSELWHACAGPLVCLPHLGSLVYYFPQGHSEQVAASTRRTASSQIPSYPNVPSELLCQLQSVTLHADRDTDEIYAQMTLQPVNSEKEVVPISDLGIRHSKHPSEFFCKILTASDTSTHGGFSVPRRAAEKLFPPLDYTVQPPSQEFVVRDLHDNTWTFRHIYRGSKRLKAGDAVIFVRDKKSQLLVGVRHANSQHTTLPSSVLSADSMHIGVLAAAAHASANQTPFTIFYNPRACPSEFVIPLAKYRKAVYETQLSVGMRFGMMFETEESSKRRYMGTIVGISDLDPLRWPGSKWRNIQVELDEPGCGNKQNRVSSWEIEIPDNLLIFPSLTSTLKRPLHSGILENEWGNLLRRPFVNGNVDLSNSTENLYSEHLMKLLFKPLMVNSPGNFSSLPQKTKTTLAEDNQKFHASCSESLPLKDLHHSQSFPDQSSSFNLNSLGKINNPPSSATITDESKSKSEVLADHAFDLPSMEGYNIEKMAVNTMNSQSLAGQSTFLQQDQSLWPQIESSIPHTQLADVTQSDFAVLNSVFPQLDIEEWIVNSSQEQAFLLPQATTNTPLPLMSHDMWDHHVKNLKISPQSEQLMTTCHKRVYDNVNVDISNILGSMADPSASCTTLDEFCTLKEGVFQNPLDCMVSNVSSSQDMQSQMTSVSLAESRAFSLQDNIGGTSSSHVDFDESSFLHNNSWHQVSAPKRTYTKVQKAGCVGRSIDVTTFKNYEELISAIEGMFGLEGLLNDTRGSGWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPSEVEQMSEEGMKLLDSATMQGSI 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2039 873 SUPERFAMILY DNA-binding pseudobarrel domain 168 291 IPR015300 -
Bisa09g2039 873 Gene3D - 176 263 IPR015300 -
Bisa09g2039 873 FunFam Auxin response factor 763 857 - -
Bisa09g2039 873 Pfam AUX/IAA family 764 854 IPR033389 -
Bisa09g2039 873 CDD B3_DNA 177 261 IPR003340 GO:0003677
Bisa09g2039 873 SUPERFAMILY CAD & PB1 domains 779 847 - -
Bisa09g2039 873 Gene3D - 764 857 - -
Bisa09g2039 873 ProSiteProfiles PB1 domain profile. 768 852 IPR000270 GO:0005515
Bisa09g2039 873 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 70 858 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bisa09g2039 873 FunFam Auxin response factor 326 397 - -
Bisa09g2039 873 SMART B3_2 178 264 IPR003340 GO:0003677
Bisa09g2039 873 Pfam Auxin response factor 288 371 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bisa09g2039 873 Gene3D - 326 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2039 Bisa-ChrBisa09 32574941 32579966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2039 71 869 B3 DNA Binding Superfamily AT1G19850 55.000 0.0 848