Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2014 ATGGCTGGTTTGTTCTCTCTAGGTGGAAAGGAAGGCCCACAGAGGAAGCAAAAGGAAGAGAACAGGAATAGCAATAGCCTAGTGTGGTTGAGGGATCAGGAGGAGGAGATCTACAGCAACAAGGGGTTCGAGATATGGACACAGTCGCATCATCATCATCATCATCCACGCCAGCACTTGAACAACGGGTTCTCTCTGCTCGGGGTGGGTCCTAGTGGCGGATTGACGTCGGTGATGAGGTCTAGAGGCATAGGAGGAGGCATCAACTGGTTGGAGCTGGGGCAATTCCCTCCGGAACTGAACTCTCCGGCGGTGTTTCAGTGTGTGAAAGTGAACGCAATGGACGCTCCGGATGAGCAGTACGCGTATCAAACGGCTGTGAACATCGGAGGGCATGTGTTCAAGGGAATTTTGTACGATCAAGGCCCTGAGGGTTCTTATAACGCCGTCGGTGAGCGCTCTTCAGCTGCAGCTGGTAATCAAGGTCAACAACAACAACAACTGAATCTCATAACCGCCACAACCACCACCAGCACCATCCCTTTTGATCCTTCAATCTACCCCGTTCCTCTCAACACTTTCATGGCTGGTACGCAATTCTTCCCTCCCCCAAGGTCCTAG 621 0.5217 MAGLFSLGGKEGPQRKQKEENRNSNSLVWLRDQEEEIYSNKGFEIWTQSHHHHHHPRQHLNNGFSLLGVGPSGGLTSVMRSRGIGGGINWLELGQFPPELNSPAVFQCVKVNAMDAPDEQYAYQTAVNIGGHVFKGILYDQGPEGSYNAVGERSSAAAGNQGQQQQQLNLITATTTTSTIPFDPSIYPVPLNTFMAGTQFFPPPRS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2014 206 Pfam Domain of unknown function (DUF702) 76 144 - -
Bisa09g2014 206 NCBIfam LRP1 C-terminal domain 95 143 IPR006511 -
Bisa09g2014 206 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 91 190 IPR007818 GO:0003700|GO:0006355
Bisa09g2014 206 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2014 Bisa-ChrBisa09 32154810 32156049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2014 73 206 C2H2 Transcription Factor Family AT1G75520 43.226 1.35e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bisa09g2014 DUF702 1.4e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0657 05 10784788 10786173 Bisa09g2014 09 32154810 32156049 CCT
Bisa09g2014 09 32154810 32156049 Bisa09g2014 09 32154810 32156049 ECH