Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2013 ATGGCTGGTTTGTTCTCTCTAGGTGGAAAGGAAGGCCCACAGAAGAAGCAAAAGGAAGAGAACAGGAATAGCAATAGCCTAGTGTGGTTGAGGGATCAGGAGGAGGAGATCTACAGCACCAAGGGGTTCGAGATATGGACACAGTCGCATCATCATCATCATCATTCACGCCAGCACTTGAACAACGGGTTCTCTCTGCTCGGGGTGGGTCCTAGTGGCGGATTGGCGTCGGTGATGAGGTCTAGAGGGCTGGAGCTGGGACAATTCCCTCCGGAACTGAACTCTCCGGCGGTATTTCAGTGCGTGAAAGTGAACGCAATGGACGCTCCGGATGAGCAGTACGCGTATCAAACGGCTGTGAACATCGGAGGGCATGTGTTCAAGGGAATTTTGTACGATCAAGGCCCTGAGGGTTCTTATAACGGCGTCGGTGAGCGCTCTTCAGCTGCAGCTGATAATCAAGGTCAACAACAACAACAACTGAATCTCATAACCGCCACAACCACCACCAGCACCCTCCCTTTTGATCCTTCAATCTACCCCGTTCCTCTCAACACTTTCATGGCTGGTACGCCATTCTTCCCTCCCCCAAGGTCGTAA 600 0.5217 MAGLFSLGGKEGPQKKQKEENRNSNSLVWLRDQEEEIYSTKGFEIWTQSHHHHHHSRQHLNNGFSLLGVGPSGGLASVMRSRGLELGQFPPELNSPAVFQCVKVNAMDAPDEQYAYQTAVNIGGHVFKGILYDQGPEGSYNGVGERSSAAADNQGQQQQQLNLITATTTTSTLPFDPSIYPVPLNTFMAGTPFFPPPRS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2013 199 NCBIfam LRP1 C-terminal domain 88 136 IPR006511 -
Bisa09g2013 199 Pfam Domain of unknown function (DUF702) 62 137 - -
Bisa09g2013 199 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 81 171 IPR007818 GO:0003700|GO:0006355
Bisa09g2013 199 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2013 Bisa-ChrBisa09 32011777 32013199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2013 83 199 C2H2 Transcription Factor Family AT1G75520 48.175 6.26e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bisa09g2013 DUF702 4.9e-23 No_clan