LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa09g2012	ATGAGTGACGGAGATGGTTGTTCGACGATGGATTTGTTACGCTCGGAGCCAATGCAACTGGTACAACTGATCATTCCAACGGAATCAGCTCAACGAGCCGTCACTTACCTTGGCGATCTCAGCCTCTTTCAATTCAAAGATCTTAATGCAGATAAAAGCCCATTCCAACGGACATATGCTGCTCAGATTAAAAGATGTGGGGAAATGGCACGCAACCTACGGTTCTTTAAAGAACAAATGGCAAAGGCTGGTGTATCACCCTCGACAGGGTCAACAAGAGATAGAGAAATTGATCTGGACAGTTTAGAGGTTAAACTTGCAGAGCTTGAAGCTGAACTAACTGAAGTTAATACAAACAATGATAAGTTGCAACAAAGTTACAGTGAACTATTAGAGTATAAACTTGTTCTGCAGAAGGCTGCTGAGTTTTTCTCTTCAGCGAAAAGAAGTGCAACATCTCAACAGAGAGAACTTGGAGTCCAGAGCAATACGGAAGGTTCTATTGACAGTCCATTATTACAGGAGCAAGAGATGACAACAGATTCATCAAAGCCGATTCAGCTGGGCTTTATCAGTGGCCTTGTTCCTAAAGAAAAATCAATATCTTTTGAAAGAATTTTATTTCATGCTACTAGGGGTAATGTGTATATGAAGCAAGCCGTCATTGAACGTCCTGTTCTTCATCATTTGTCGGGAGAGAAGGTTGATAAAAATGTGTTTCTTATATTTTATTCCGGAGAGAGAGCTAAAAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGTTATCCTTTAACGGATGACTTGAGTAAACAACTTCAGATGGTTACAGAGGTGACTGGAAGACTTTCGGAATTGAAGACTACCATTGATGCTGGATTGCTGCACTGGAGCACTCTATTGCAGACAATTGGAAATCACTGCGAGCAGTGGAGCCTTCTGGTGAAGAAGGAGAAATCCATTTATTACACCCTGAATATGTTTAGCATTGATGTGACAAAGAAATGTCTTGTTGCAGAAGGTTGGTGTCCTGTTTTTGCAACAAATCAGATTCAAAATGCATTGCAGAGGGCAAGCACAGACAGTAACTCACAAGTTGGGACTATATTCCAGGTTTTACAAACAAAGGAATCACGACCTACCTATTTCCGCACAAATAAATTTACTTCTTATTTTCAAGAAATTGTCGATGCTTATGGAGTTGCCAAGTACCGGGAGGCAAATCCTGGTGTATACACAATCGTCACCTTCCCATTCCTTTTTGCTGTTATGTTTGGTGATTGGGGGCATGGTATATGCTTATTGCTACCAACTTTATATTTCATAATCGGAGAGAAAAAATTTTCTACTCAGAAACTTGGGGACATAATAGCAATGACTTTTGGTGGCCGCTATGTTATTATGTTGATGGCACTATTCTCAATCTACACAGGATTCATATACAATGAATTCTTCTCTGTTCCATTTGAACTATTTGGGCCATCTGCCTACGGATGCCATGATCGTTCATGCAGTGATGCCGCTACAATAGGGATGATAAAGGTTCGTGGCACCTATCCATTTGGTGTAGATCCTATATGGCATGGTACTCGGAGCGAACTGCCATTTCTTAACTCTTTGAAGATGAAGATGTCAATCCTATTGGGTGTGGCACAGATGAATCTTGGAATTGTATTGAGTTACTATAACGCAAAATACTTTGGAAACGACTTAAATATTTGGCACCAGTTTATTCCCCAGATAATATTTTTAAATAGCCTGTTTGGCTATCTTTCACTCCTCATAATTGTTAAATGGTGTACTGGATCTCAAGCTGACCTGTATCATGTAATAATATACATGTTCCTTAGTCCAACTGATGATTTGGGTGAAAACCAGCTCTTTGATGGCCAAAAGCTCCTTCAAATTGTGTTATTATTGTTGGCAATCGTTGCTGTACCTTGGATGTTGTTCCCAAAGCCCTTTCTCCTGAAGAAGCAACACCAAGAAAGACATCACGGTCAATCTTACTCTTTGCTTGACCACATCGGTGGCCCTCTTGAAACAGAGCAACATAGTAAACGCCATGAACATGAGGAGTTTGATTTCAGCGAGGTTTTTGTGCACCAACTTATCCATACCATAGAATTTGTTCTTGGAGCAGTATCTAATACAGCTTCATATTTACGTTTATGGGCCCTCAGTCTGGCTCATTCTGAGCTGTCGAGTGTATTCTTTGACAAAGTTCTAATGTTGGCATGGGGGTCCAACAACACCATCGTTCTCATTATTGGCATTATTGTTTTCATATGCGCAACTGTTGGTGTGCTACTGATAATGGAAACTTTAAGTGCTTTCTTGCATGCTTTGAGGCTTCACTGGATAGAGTTCCAGAACAAGTTTTATGAGGGTGATGGTTACAAGTTCAGCCCATTTTCATTTGCATCACTTGATGACGAGGATGAATTGTAG	2457	0.4025	MSDGDGCSTMDLLRSEPMQLVQLIIPTESAQRAVTYLGDLSLFQFKDLNADKSPFQRTYAAQIKRCGEMARNLRFFKEQMAKAGVSPSTGSTRDREIDLDSLEVKLAELEAELTEVNTNNDKLQQSYSELLEYKLVLQKAAEFFSSAKRSATSQQRELGVQSNTEGSIDSPLLQEQEMTTDSSKPIQLGFISGLVPKEKSISFERILFHATRGNVYMKQAVIERPVLHHLSGEKVDKNVFLIFYSGERAKSKILKICDAFGANRYPLTDDLSKQLQMVTEVTGRLSELKTTIDAGLLHWSTLLQTIGNHCEQWSLLVKKEKSIYYTLNMFSIDVTKKCLVAEGWCPVFATNQIQNALQRASTDSNSQVGTIFQVLQTKESRPTYFRTNKFTSYFQEIVDAYGVAKYREANPGVYTIVTFPFLFAVMFGDWGHGICLLLPTLYFIIGEKKFSTQKLGDIIAMTFGGRYVIMLMALFSIYTGFIYNEFFSVPFELFGPSAYGCHDRSCSDAATIGMIKVRGTYPFGVDPIWHGTRSELPFLNSLKMKMSILLGVAQMNLGIVLSYYNAKYFGNDLNIWHQFIPQIIFLNSLFGYLSLLIIVKWCTGSQADLYHVIIYMFLSPTDDLGENQLFDGQKLLQIVLLLLAIVAVPWMLFPKPFLLKKQHQERHHGQSYSLLDHIGGPLETEQHSKRHEHEEFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFFDKVLMLAWGSNNTIVLIIGIIVFICATVGVLLIMETLSAFLHALRLHWIEFQNKFYEGDGYKFSPFSFASLDDEDEL	818

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa09g2012	818	PIRSF	ATP6V0A1	8	818	IPR026028	GO:0000220\|GO:0046961
	Bisa09g2012	818	Pfam	V-type ATPase 116kDa subunit family	36	809	IPR002490	GO:0033179\|GO:0046961\|GO:1902600
	Bisa09g2012	818	Coils	Coil	92	126	-	-
	Bisa09g2012	818	PANTHER	VACUOLAR PROTON ATPASES	12	815	IPR002490	GO:0033179\|GO:0046961\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa09g2012	Bisa-ChrBisa09	31926690	31945414	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa09g2012	10	817	Primary Pumps ATPases(2)	AT4G39080	73.300	0.0	1242