Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1951 ATGGCGGAGCTTGAGAATCCGCCTTCAATGGCAGTTTCTACGGCTTCTGGAGAAGCTAGCTTTTCATCGTCAGGTTTTCAAAACGCGCCCGATGAACCACCCCCAACGAAAAAGAAGCGTAACCTCCCTGGAATGCCAGATCCAGAAGCTGAGGTGATTGCTTTATCGCCTAAAACACTGTTGGCGACGAACCGTTTCGTATGCGAGATCTGCAATAAAGGATTTCAACGAGACCAGAACCTGCAGCTTCACCGACGCGGCCATAACCTCCCATGGAAACTCCGGCAACGAACCAGCAAGGAAGTTCGTAAGAGAGTCTACGTGTGCCCGGAGCCTTCCTGCGTCCACCACAACCCGGCGAGGGCGCTAGGTGACCTCACTGGCATTAAGAAGCACTTCTGTAGAAAACATGGCGAAAAGAAGTGGAAATGCGATCGTTGCTCCAAGAAATACGCCGTACAGTCTGATTGGAAGGCCCATATGAAGACTTGCGGAACTAGAGAGTACAAATGTGACTGTGGCACCTTGTTCTCTAGGAGGGATAGCTTCATTACCCACAGGGCTTTCTGCGATGCCTTAGCGGAGGAGAGCGCCAGAGCCCAAACCCTAACCATCGGTGGAGGCTCTGAGGGGAATTCGAATAGGAAGGTCGCTATGGCTTCGCCGCCGCAGCCTCCACTTACTCCGTCTGCGTCTGTGGTTTCACCAGCTTTGTCCATTCAGAGCTCAGGTGAGGTCTCGGAAAACCCGATCGGACTCTCGCCGCCGTCCTCGAACGTAACGTGTATACCGACCCCAGTCACAAACAGCACTCCCTCCAGTTCTGCCGGTGTCTTCGCCAGCATATTTGCATCTTCAAGCGCTGCTCCTTCCCAAACTCCATCGACATTTTCGTCGTACTCCAACGTGATGTCCAGCTTGGCTCGCTCGGATTGCCCAACGACTATCCCAACGATATCTGCCATAGAGCCCGCATCTCTGTCTCTCTCCACATCACTTTATCTCTCCAATAATGACTCGTCCCTGTTCCCGGACCAGCACGACCCTCGGCACTACACTACATCCCCACAGCCTGCACTGTCCGCCACTGCATTACTTCAAAAGGCAGCTCAAATGGGTGCTGCAGCATCCAATGCTTCTCTACTTCGAGGTTTAGGCTTGGCAACATCATCTCCCACTGGTCAAGACGATAACACCTCAACCCAATGGAACAGACATGTAAAGACAGAGAATCCCTCGTTGACTGATGATGACCTTGTGCTGGGATTTCCTTCTGCTGGGAATGCAGGCTTCGCAGGTATGATGATGGGCTCGTCTTCGCCATTCGGACAACAGCCCATGACTCGTGATCTTCTTGGTCTAAACATAGGTGGTGCTGGTGGCGGAGCTAGCAGGGGTGGTCTTTCTGCTTTGCTCACCTCCTTTGGTGGCAGATTCGACGTTGCAGATGCATCAACGGGACGGGGAAGTTCGCCAGCAGAAGGTTAA 1488 0.5296 MAELENPPSMAVSTASGEASFSSSGFQNAPDEPPPTKKKRNLPGMPDPEAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSKEVRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDRCSKKYAVQSDWKAHMKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARAQTLTIGGGSEGNSNRKVAMASPPQPPLTPSASVVSPALSIQSSGEVSENPIGLSPPSSNVTCIPTPVTNSTPSSSAGVFASIFASSSAAPSQTPSTFSSYSNVMSSLARSDCPTTIPTISAIEPASLSLSTSLYLSNNDSSLFPDQHDPRHYTTSPQPALSATALLQKAAQMGAAASNASLLRGLGLATSSPTGQDDNTSTQWNRHVKTENPSLTDDDLVLGFPSAGNAGFAGMMMGSSSPFGQQPMTRDLLGLNIGGAGGGASRGGLSALLTSFGGRFDVADASTGRGSSPAEG 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1951 495 Gene3D Classic Zinc Finger 46 112 - -
Bisa09g1951 495 MobiDBLite consensus disorder prediction 1 49 - -
Bisa09g1951 495 FunFam protein indeterminate-domain 12-like 45 113 - -
Bisa09g1951 495 MobiDBLite consensus disorder prediction 9 30 - -
Bisa09g1951 495 MobiDBLite consensus disorder prediction 204 219 - -
Bisa09g1951 495 MobiDBLite consensus disorder prediction 204 232 - -
Bisa09g1951 495 Pfam Zinc-finger of C2H2 type 66 88 - -
Bisa09g1951 495 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 22 461 IPR031140 -
Bisa09g1951 495 FunFam protein indeterminate-domain 5, chloroplastic-like 120 199 - -
Bisa09g1951 495 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 88 IPR013087 -
Bisa09g1951 495 SUPERFAMILY beta-beta-alpha zinc fingers 65 163 IPR036236 -
Bisa09g1951 495 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Bisa09g1951 495 SMART c2h2final6 107 137 IPR013087 -
Bisa09g1951 495 SMART c2h2final6 66 88 IPR013087 -
Bisa09g1951 495 SMART c2h2final6 142 162 IPR013087 -
Bisa09g1951 495 Gene3D Classic Zinc Finger 121 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1951 Bisa-ChrBisa09 30915789 30918139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1951 13 474 IDZ Gene Family AT5G66730 51.779 1.03e-145 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa09g1951 zf-met 0.0036 CL0361