Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1933 ATGAAACACTTTCTTCTTTTTTTCTTCATACTACACTTTCTAGCGTCAGAAGCAGAGCAGAATTACTCTGGAAATTCCGTTCTAAGTTGTAGAAACAGCGACGAGAACGGTCCTTCTTCAGCTTTCCTCTACACCTGCAATGGCCTCAACAAATCCTGCGGGGCCTTCCTCATCTTCAAATCCCAACCTCCTTACAACACCGTCCCTGCAATCTCAAATCTGACATCCTCAAACCCAGAAGAGCTCGCGATAATCAACGACGCCACCATGCTCACAGTGTTCCCCACTGGCAAAGAGGTGATCGTCCCTGTAAACTGTTCGTGTAGAACCAATGATTATTATTACCAAGCTGAAGCCAAATACACATTGTTTACAATTCAAACGTATTTCACTATAGCAAATGACACGTACCAGGGTTTGTCCACGTGTGATGCTCTCAAGCGTTATAATTCATATGGGGAATTAGATTTGAAACCTGGTATAGAGTTACATGTACCACTCAGATGTGCTTGTCCTACTATGTTTCAAACAGACAATGGGACTAGGTTTTTAGTGACTTACCCTGTTGATTGGGGGGATAGTATAGATGCTCTTGCTGCTAGATTCAAAGTGAATTCAAGTTCTTTACTTGATGCTACTGTTTTTACTACATCCACCCTTTTTCCATTCACGACTATTCTAATTCCCTTGAGAAATGAACCTGACAGCTCAATCACCATAACTCACCATGGTCAACCTAAATTTGTTTCACCTCCTCCTGTTTCTAGGAAGAGTAACTCAAGAACAAAACTTTACGTCGCTGTTGGCACCACAGGGGGATTTGTGGGGGTTGTGTGTGTGATTTTGTGTTCTGTGTTCATGTTGAGGAAGAGATCAGCGACAGCAAGACTCGTTGAGGCAGGTAAAGAGGGGAAAACGAAGTGGGCAACTTCAGAGGATATACGTGAGGAGATTGCGAGCATTGAGCATGTTTCTAAAGAGTACAGATTTAAGGAGATAAAGGAGGCGACTGAGAATTTTAGTTCAAAGAATAGGATTAATGGCTGTGTGTATAAGGGAGTGTTTGGGAAGGATGTCTTCGCCGTGAAGAGAATGAGAGCAGATGCGTCCAAGGAAGTGAATCTTCTGAAGAAGATCAATCATTTCAATCTGATTAAGCTTCAAGGTTACTGCGAAAATGAGGGCTTCTTCTACCTTGTTTTTGAGTACATGGAGAACGGGTCCTTAAGAGAATGGCTGGAGGAAAACATGTCCAGGGAGAATCAGGGTTGGGGTAAGAGGATCCAGATTGCACTGGACATCGCCAATGGACTTCAGTACCTTCACGACTTCACAGAGCCAAGCTACGTGCACAAGGACATTAAGTCCAGTAACATTCTGCTAAACAAGAATTTGAGAGCCAAGATTGCTAATTTTAGCCTTGCGAAGGAGTTGGAGGGGGAGAAAACCTGCACAACTCACGTGATGGGCACGAGGGGTTATATGGCCCCAGAGTATCTGTACACAGGGATGGTGAGTCCCTACATGGACGTGTATGCCTTTGGAGTGGTAGTGTTAGAATTGGTCACTGGTAAAGATTCTGTTTTTATACAAGATGGAAGAGAAGTGAAGCTTTCTGCAGTTATAGTGCCTCTCATGGGGAAGCAGAATGCAGAAGAGAATCTCAGCTCGTTGCTTGATCCTAGCCTTCTCACTGGAAACAACGAGAAAGTGCTTGCTGTGGAGCTAGCTGAACTAGGTGTAGCCTGCTTGATGCAAGAACCAGCAAGCAGACCAAGCATGGCTGAAATAGTCTCCACCTTGTTGAAGATACATGCGAGTGTGCATCCAAGGACATTGCTCACCACACATTGTAACAGCCTTCGCCTGGAGAGATGA 1878 0.443 MKHFLLFFFILHFLASEAEQNYSGNSVLSCRNSDENGPSSAFLYTCNGLNKSCGAFLIFKSQPPYNTVPAISNLTSSNPEELAIINDATMLTVFPTGKEVIVPVNCSCRTNDYYYQAEAKYTLFTIQTYFTIANDTYQGLSTCDALKRYNSYGELDLKPGIELHVPLRCACPTMFQTDNGTRFLVTYPVDWGDSIDALAARFKVNSSSLLDATVFTTSTLFPFTTILIPLRNEPDSSITITHHGQPKFVSPPPVSRKSNSRTKLYVAVGTTGGFVGVVCVILCSVFMLRKRSATARLVEAGKEGKTKWATSEDIREEIASIEHVSKEYRFKEIKEATENFSSKNRINGCVYKGVFGKDVFAVKRMRADASKEVNLLKKINHFNLIKLQGYCENEGFFYLVFEYMENGSLREWLEENMSRENQGWGKRIQIALDIANGLQYLHDFTEPSYVHKDIKSSNILLNKNLRAKIANFSLAKELEGEKTCTTHVMGTRGYMAPEYLYTGMVSPYMDVYAFGVVVLELVTGKDSVFIQDGREVKLSAVIVPLMGKQNAEENLSSLLDPSLLTGNNEKVLAVELAELGVACLMQEPASRPSMAEIVSTLLKIHASVHPRTLLTTHCNSLRLER 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1933 625 SUPERFAMILY Protein kinase-like (PK-like) 324 601 IPR011009 -
Bisa09g1933 625 SMART serkin_6 340 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1933 625 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 5 609 - -
Bisa09g1933 625 FunFam PTI1-like tyrosine-protein kinase 3 404 612 - -
Bisa09g1933 625 Gene3D Transferase(Phosphotransferase) domain 1 404 615 - -
Bisa09g1933 625 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Bisa09g1933 625 Gene3D Phosphorylase Kinase; domain 1 318 403 - -
Bisa09g1933 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Bisa09g1933 625 Pfam Protein kinase domain 348 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1933 625 ProSiteProfiles Protein kinase domain profile. 292 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1933 Bisa-ChrBisa09 30624280 30626157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1933 4 609 Receptor kinase-like Gene Family AT2G23770 39.520 7.32e-130 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bisa09g1933 Pkinase 1.9e-41 CL0016